BLASTX nr result

ID: Coptis21_contig00034116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034116
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37575.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinif...   141   5e-32
ref|XP_002517217.1| brushy protein, putative [Ricinus communis] ...   133   1e-29
ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_004165445.1| PREDICTED: LOW QUALITY PROTEIN: protein TONS...   130   1e-28

>emb|CBI37575.3| unnamed protein product [Vitis vinifera]
          Length = 1342

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/90 (76%), Positives = 80/90 (88%)
 Frame = +2

Query: 2   KLACNLKKDSSSYRSSQFLKEFIDAHNNLGMLEMDLDNLEEAQRILLEGLKICNEEEVIE 181
           +LA  LK++  S +SS FLKEFIDAHNN+GMLEMDLDNLEEA +IL +GLKIC+EEEVI+
Sbjct: 144 RLAQTLKENPPSNKSS-FLKEFIDAHNNIGMLEMDLDNLEEAHKILTKGLKICDEEEVID 202

Query: 182 DDDGRSRLHHNLGSVYLEMRVWDKAREHIE 271
           DDDGRSRLHHNLG VY+E+R WDKAREHIE
Sbjct: 203 DDDGRSRLHHNLGRVYMELRKWDKAREHIE 232


>ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinifera]
          Length = 1309

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/90 (76%), Positives = 80/90 (88%)
 Frame = +2

Query: 2   KLACNLKKDSSSYRSSQFLKEFIDAHNNLGMLEMDLDNLEEAQRILLEGLKICNEEEVIE 181
           +LA  LK++  S +SS FLKEFIDAHNN+GMLEMDLDNLEEA +IL +GLKIC+EEEVI+
Sbjct: 144 RLAQTLKENPPSNKSS-FLKEFIDAHNNIGMLEMDLDNLEEAHKILTKGLKICDEEEVID 202

Query: 182 DDDGRSRLHHNLGSVYLEMRVWDKAREHIE 271
           DDDGRSRLHHNLG VY+E+R WDKAREHIE
Sbjct: 203 DDDGRSRLHHNLGRVYMELRKWDKAREHIE 232


>ref|XP_002517217.1| brushy protein, putative [Ricinus communis]
           gi|223543588|gb|EEF45117.1| brushy protein, putative
           [Ricinus communis]
          Length = 1327

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/90 (72%), Positives = 76/90 (84%)
 Frame = +2

Query: 2   KLACNLKKDSSSYRSSQFLKEFIDAHNNLGMLEMDLDNLEEAQRILLEGLKICNEEEVIE 181
           KLA NLK++  S  SS FLKE+IDAHNN+GMLEMDLDNL EA+ +L +GL+IC EEEV E
Sbjct: 144 KLAQNLKENPPS-ASSSFLKEYIDAHNNIGMLEMDLDNLGEAEEVLTKGLQICEEEEVSE 202

Query: 182 DDDGRSRLHHNLGSVYLEMRVWDKAREHIE 271
           DDDGRSRLHHNLG+VY+E R W KAR+HIE
Sbjct: 203 DDDGRSRLHHNLGNVYIERREWSKARDHIE 232


>ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|222852793|gb|EEE90340.1|
           predicted protein [Populus trichocarpa]
          Length = 1353

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/90 (70%), Positives = 81/90 (90%)
 Frame = +2

Query: 2   KLACNLKKDSSSYRSSQFLKEFIDAHNNLGMLEMDLDNLEEAQRILLEGLKICNEEEVIE 181
           KLA +LK++  + +SS FLKE+IDAHNN+GM+EMDLDNLEEA++IL  GL+IC+EEEV  
Sbjct: 146 KLAQSLKENPHTNKSS-FLKEYIDAHNNIGMIEMDLDNLEEAKKILARGLEICDEEEVDA 204

Query: 182 DDDGRSRLHHNLGSVYLEMRVWDKAREHIE 271
           DDDGRSRLHHNLG+VY+E++VWDKA+EHI+
Sbjct: 205 DDDGRSRLHHNLGNVYMELKVWDKAQEHIK 234


>ref|XP_004165445.1| PREDICTED: LOW QUALITY PROTEIN: protein TONSOKU-like [Cucumis
           sativus]
          Length = 1342

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/83 (71%), Positives = 71/83 (85%)
 Frame = +2

Query: 23  KDSSSYRSSQFLKEFIDAHNNLGMLEMDLDNLEEAQRILLEGLKICNEEEVIEDDDGRSR 202
           KD        FLKE++DAHNNLGMLEMDLDNLEEA+ IL EGL+IC EEEV +DDDGRSR
Sbjct: 150 KDHPPKIGCSFLKEYVDAHNNLGMLEMDLDNLEEAKNILTEGLEICEEEEVDQDDDGRSR 209

Query: 203 LHHNLGSVYLEMRVWDKAREHIE 271
           LHHNLGSVY+E+R+WD+A++H+E
Sbjct: 210 LHHNLGSVYMELRMWDQAKKHVE 232


Top