BLASTX nr result

ID: Coptis21_contig00034115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034115
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274737.1| PREDICTED: UPF0420 protein-like [Vitis vinif...   140   1e-45
emb|CBI30394.3| unnamed protein product [Vitis vinifera]              140   1e-45
ref|XP_002309136.1| predicted protein [Populus trichocarpa] gi|2...   139   7e-45
ref|XP_004148619.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   141   1e-44
ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]     139   1e-44

>ref|XP_002274737.1| PREDICTED: UPF0420 protein-like [Vitis vinifera]
          Length = 503

 Score =  140 bits (354), Expect(2) = 1e-45
 Identities = 71/105 (67%), Positives = 76/105 (72%)
 Frame = +2

Query: 158 DGLGAIGRLFIGGRFGNLFDDDPKQWRMYADFIGSVGSIFDLSTXXXXXXXXXXXXXGNL 337
           DG+GA+GRLFIGG+FGNLFDDDPKQWRMYAD IGS GSIFDLST             GNL
Sbjct: 187 DGIGAVGRLFIGGQFGNLFDDDPKQWRMYADLIGSAGSIFDLSTQLYPAYFLQLASLGNL 246

Query: 338 AKAVARGLKDPSFRVIQSHFAISENLGDXXXXXXXXXXXXQLFGL 472
           AKAVARGLKDPSFRVIQ+HFAIS NLG+            QL GL
Sbjct: 247 AKAVARGLKDPSFRVIQNHFAISGNLGEVAAKEEVWEVAAQLLGL 291



 Score = 67.8 bits (164), Expect(2) = 1e-45
 Identities = 29/32 (90%), Positives = 32/32 (100%)
 Frame = +3

Query: 3   VSDDYLEYMVLQFPTNITAWVCHTLVTSSLLK 98
           VSDDYLEYM+LQFPTN+TAW+CHTLVTSSLLK
Sbjct: 127 VSDDYLEYMLLQFPTNVTAWICHTLVTSSLLK 158


>emb|CBI30394.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score =  140 bits (354), Expect(2) = 1e-45
 Identities = 71/105 (67%), Positives = 76/105 (72%)
 Frame = +2

Query: 158 DGLGAIGRLFIGGRFGNLFDDDPKQWRMYADFIGSVGSIFDLSTXXXXXXXXXXXXXGNL 337
           DG+GA+GRLFIGG+FGNLFDDDPKQWRMYAD IGS GSIFDLST             GNL
Sbjct: 146 DGIGAVGRLFIGGQFGNLFDDDPKQWRMYADLIGSAGSIFDLSTQLYPAYFLQLASLGNL 205

Query: 338 AKAVARGLKDPSFRVIQSHFAISENLGDXXXXXXXXXXXXQLFGL 472
           AKAVARGLKDPSFRVIQ+HFAIS NLG+            QL GL
Sbjct: 206 AKAVARGLKDPSFRVIQNHFAISGNLGEVAAKEEVWEVAAQLLGL 250



 Score = 67.8 bits (164), Expect(2) = 1e-45
 Identities = 29/32 (90%), Positives = 32/32 (100%)
 Frame = +3

Query: 3   VSDDYLEYMVLQFPTNITAWVCHTLVTSSLLK 98
           VSDDYLEYM+LQFPTN+TAW+CHTLVTSSLLK
Sbjct: 89  VSDDYLEYMLLQFPTNVTAWICHTLVTSSLLK 120


>ref|XP_002309136.1| predicted protein [Populus trichocarpa] gi|222855112|gb|EEE92659.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  139 bits (350), Expect(2) = 7e-45
 Identities = 69/105 (65%), Positives = 76/105 (72%)
 Frame = +2

Query: 158 DGLGAIGRLFIGGRFGNLFDDDPKQWRMYADFIGSVGSIFDLSTXXXXXXXXXXXXXGNL 337
           DG+GA+GRLFIGGRFG+LFDDDPKQWRMYADFIGS GSIFDL+T             GNL
Sbjct: 171 DGIGALGRLFIGGRFGDLFDDDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLASLGNL 230

Query: 338 AKAVARGLKDPSFRVIQSHFAISENLGDXXXXXXXXXXXXQLFGL 472
            KAVARGLKDPSFRVIQ+HFA+S NLG+            QL GL
Sbjct: 231 TKAVARGLKDPSFRVIQNHFAVSGNLGEVAAKEEVWEVGAQLLGL 275



 Score = 66.6 bits (161), Expect(2) = 7e-45
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   VSDDYLEYMVLQFPTNITAWVCHTLVTSSLLK 98
           VSDDYL+YMVLQFPTNIT W+CHTLVTSSLLK
Sbjct: 115 VSDDYLQYMVLQFPTNITGWICHTLVTSSLLK 146


>ref|XP_004148619.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
           gi|449518467|ref|XP_004166263.1| PREDICTED: UPF0420
           protein C16orf58 homolog [Cucumis sativus]
          Length = 495

 Score =  141 bits (356), Expect(2) = 1e-44
 Identities = 70/105 (66%), Positives = 76/105 (72%)
 Frame = +2

Query: 158 DGLGAIGRLFIGGRFGNLFDDDPKQWRMYADFIGSVGSIFDLSTXXXXXXXXXXXXXGNL 337
           DG+GA+GRLFIGGRFGNLFDDDPKQWRMYADFIGS GSIFDL+T             GNL
Sbjct: 183 DGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATPLYPSYFLPLASLGNL 242

Query: 338 AKAVARGLKDPSFRVIQSHFAISENLGDXXXXXXXXXXXXQLFGL 472
            KAVARGLKDPSFRVIQ+HFA+S NLG+            QL GL
Sbjct: 243 TKAVARGLKDPSFRVIQNHFAVSGNLGEIAAKEEVWEVVAQLLGL 287



 Score = 63.5 bits (153), Expect(2) = 1e-44
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +3

Query: 3   VSDDYLEYMVLQFPTNITAWVCHTLVTSSLLK 98
           VSDDYL+YM+ QFPTN+T W+CHTLVTSSLLK
Sbjct: 127 VSDDYLQYMIRQFPTNVTGWICHTLVTSSLLK 158


>ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]
          Length = 480

 Score =  139 bits (351), Expect(2) = 1e-44
 Identities = 70/105 (66%), Positives = 76/105 (72%)
 Frame = +2

Query: 158 DGLGAIGRLFIGGRFGNLFDDDPKQWRMYADFIGSVGSIFDLSTXXXXXXXXXXXXXGNL 337
           DG+GA+GRLFIGGRFG+LFDDDPKQWRMYADFIGS GSIFDL+T             GNL
Sbjct: 163 DGIGAVGRLFIGGRFGSLFDDDPKQWRMYADFIGSAGSIFDLTTQLYPAYFLPLASLGNL 222

Query: 338 AKAVARGLKDPSFRVIQSHFAISENLGDXXXXXXXXXXXXQLFGL 472
            KAVARGLKDPSFRVIQ+HFAIS NLG+            QL GL
Sbjct: 223 TKAVARGLKDPSFRVIQNHFAISGNLGEVAAKEEVWEVVAQLVGL 267



 Score = 65.1 bits (157), Expect(2) = 1e-44
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   VSDDYLEYMVLQFPTNITAWVCHTLVTSSLLK 98
           VSDDYL+YM+LQFPTN+T W+CHTLVTSSLLK
Sbjct: 107 VSDDYLDYMLLQFPTNVTGWICHTLVTSSLLK 138


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