BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034110
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...   128   4e-28
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   125   4e-27
ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi...   106   2e-21
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...    97   2e-18
ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like...    95   5e-18

>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/122 (54%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
 Frame = -1

Query: 453 GSAVSKNKKDSFSISKIWLRSKKEKPXXXXXXXXXXXXXXRFPLQKTEAA-DDFKTKDSN 277
           G+A+ ++K++SFSISKIWLR KKE P              RFP+  + AA DD K K+ +
Sbjct: 417 GNAIGRSKRESFSISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAADDLKLKNVS 476

Query: 276 NTSRRTISEIDISRWDSSGSEMGVDEEVGSSNILDSQP-MPSFARRTLLWLVGKQNKVVH 100
           +++ RT+SE++I RW++ GSE+G DEE+ S N LDSQ   PSFARRTLLWL+G+QNKVVH
Sbjct: 477 SSTGRTVSELEIGRWENGGSELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVH 536

Query: 99  SS 94
           SS
Sbjct: 537 SS 538


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
 Frame = -1

Query: 453 GSAVSKNKKDSFSISKIWLRSKKEKPXXXXXXXXXXXXXXRFPLQKTEAA-DDFKTKDSN 277
           G+A+ ++K++SFSISKIWLR KKE P              RFP+  + AA  D K K+ +
Sbjct: 417 GNAIGRSKRESFSISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAAXDXKLKNVS 476

Query: 276 NTSRRTISEIDISRWDSSGSEMGVDEEVGSSNILDSQP-MPSFARRTLLWLVGKQNKVVH 100
           +++ RT+SE++I RW++ GSE+G DEE+ S N LDSQ   PSFARRTLLWL+G+QNKVVH
Sbjct: 477 SSTGRTVSELEIGRWENGGSELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVH 536

Query: 99  SS 94
           SS
Sbjct: 537 SS 538


>ref|XP_003610233.1| RING finger protein [Medicago truncatula]
           gi|355511288|gb|AES92430.1| RING finger protein
           [Medicago truncatula]
          Length = 511

 Score =  106 bits (264), Expect = 2e-21
 Identities = 61/133 (45%), Positives = 79/133 (59%), Gaps = 5/133 (3%)
 Frame = -1

Query: 474 IHSGDSIGSAVSKNKKDSFSISKIWLRSKKEKPXXXXXXXXXXXXXXRFPLQKTEAA--D 301
           +    S G+ + +++K+SFSISKIWLR KK+K               RFPLQ    +  D
Sbjct: 375 VKGSTSEGAGIGRSRKESFSISKIWLRGKKDKKNGDVTDSSRRAVSFRFPLQSNVGSGND 434

Query: 300 DFKTKDSNNTSRRTISEIDISRWDSSGSE--MGVDEEVGSSNILDSQPM-PSFARRTLLW 130
           D K K+    +R T+SE+D  +W++ G     G DEE  S   +DSQ   PSFARRTLLW
Sbjct: 435 DLKGKNGMFHTRSTVSEMDFGKWENGGGSEFSGYDEENQSCYSMDSQARAPSFARRTLLW 494

Query: 129 LVGKQNKVVHSSS 91
           L GKQNKVVHSS+
Sbjct: 495 LTGKQNKVVHSST 507


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 12/134 (8%)
 Frame = -1

Query: 450 SAVSKNKKDSFSISKIWLRSKKEKPXXXXXXXXXXXXXXRFPLQKTEAA--------DDF 295
           +A+ +++K+SFSISKIWLR KK+KP              RFP++ +  A        DD 
Sbjct: 392 AAIGRSRKESFSISKIWLRGKKDKP-NAGADSSRRAVSFRFPVKSSVVAAASGSADDDDL 450

Query: 294 KTKDSNNTSRRTISEIDISRWDSS-GSEMGVDEEVGSSNILDSQP--MPSFARRTLLWLV 124
           K K+    +R T+SE+DI +W++  G+E   DEE  S   +DS     PSFARRTLLWL 
Sbjct: 451 KGKNCKFDTRSTMSEMDIGKWENGRGTEFDYDEENQSCYSMDSSQARAPSFARRTLLWLT 510

Query: 123 -GKQNKVVHSSSNV 85
            G+QNKVVHS+SN+
Sbjct: 511 GGRQNKVVHSASNL 524


>ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
          Length = 522

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 61/137 (44%), Positives = 81/137 (59%), Gaps = 15/137 (10%)
 Frame = -1

Query: 450 SAVSKNKKDSFSISKIWLRSKKEKPXXXXXXXXXXXXXXRFPLQKT-----------EAA 304
           +A+ +++K+SFSISKIWLR KK+KP              RFP + +           +  
Sbjct: 387 AAIGRSRKESFSISKIWLRGKKDKP-NSVADSSRRAVSFRFPAKSSVVTAASGSAHDDDD 445

Query: 303 DDFKTKDSNNTSRRTISEIDISRWDS-SGSEMGVDEEVGSSNILDSQP--MPSFARRTLL 133
           DD K K+    +R TISE+DI +W++  GSE   D+E  S   LDS     PSFARRTLL
Sbjct: 446 DDLKGKNCKFDTRSTISEMDIGKWENGGGSEFDYDDENQSCYSLDSSQARAPSFARRTLL 505

Query: 132 WLV-GKQNKVVHSSSNV 85
           WL  G+QNKVVHS+SN+
Sbjct: 506 WLTGGRQNKVVHSASNL 522