BLASTX nr result
ID: Coptis21_contig00034106
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034106 (276 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281111.1| PREDICTED: thermospermine synthase ACAULIS5 ... 105 3e-21 emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera] 105 3e-21 dbj|BAK61861.1| spermidine synthase [Citrus unshiu] 97 1e-18 dbj|BAB83654.1| spermine synthase [Arabidopsis halleri subsp. ge... 97 1e-18 ref|XP_002873952.1| spermine synthase [Arabidopsis lyrata subsp.... 97 1e-18 >ref|XP_002281111.1| PREDICTED: thermospermine synthase ACAULIS5 [Vitis vinifera] gi|296081702|emb|CBI20707.3| unnamed protein product [Vitis vinifera] Length = 336 Score = 105 bits (263), Expect = 3e-21 Identities = 51/76 (67%), Positives = 60/76 (78%), Gaps = 1/76 (1%) Frame = -3 Query: 226 MGEAVEIFPSNHVLSNGLDESPNE-ETNQECCWYEEVIDDDLKWSFALNSILHRGVSEYQ 50 MGEAVE + SN V +ES + + N CCWYEEVIDD+LKWSFALNS+LH+G S+YQ Sbjct: 1 MGEAVEFYHSNGVSGINHNESGKKIDENHMCCWYEEVIDDNLKWSFALNSVLHKGTSQYQ 60 Query: 49 EIALLDTKHFGKALVI 2 +I LLDTKHFGKALVI Sbjct: 61 DIVLLDTKHFGKALVI 76 >emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera] Length = 456 Score = 105 bits (263), Expect = 3e-21 Identities = 51/76 (67%), Positives = 60/76 (78%), Gaps = 1/76 (1%) Frame = -3 Query: 226 MGEAVEIFPSNHVLSNGLDESPNE-ETNQECCWYEEVIDDDLKWSFALNSILHRGVSEYQ 50 MGEAVE + SN V +ES + + N CCWYEEVIDD+LKWSFALNS+LH+G S+YQ Sbjct: 1 MGEAVEFYHSNGVSGINHNESGKKIDENHMCCWYEEVIDDNLKWSFALNSVLHKGTSQYQ 60 Query: 49 EIALLDTKHFGKALVI 2 +I LLDTKHFGKALVI Sbjct: 61 DIVLLDTKHFGKALVI 76 >dbj|BAK61861.1| spermidine synthase [Citrus unshiu] Length = 339 Score = 97.4 bits (241), Expect = 1e-18 Identities = 48/74 (64%), Positives = 54/74 (72%), Gaps = 1/74 (1%) Frame = -3 Query: 220 EAVEIFPSNHVLSNGLDESPNEETN-QECCWYEEVIDDDLKWSFALNSILHRGVSEYQEI 44 EAVEI N D PN N Q+CCW+EEVIDDDLKWSFALN +LH+G SE+Q+I Sbjct: 4 EAVEILFENGFSKVSNDTDPNINGNLQDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDI 63 Query: 43 ALLDTKHFGKALVI 2 ALLDTK FGK LVI Sbjct: 64 ALLDTKRFGKVLVI 77 >dbj|BAB83654.1| spermine synthase [Arabidopsis halleri subsp. gemmifera] Length = 339 Score = 97.1 bits (240), Expect = 1e-18 Identities = 50/78 (64%), Positives = 55/78 (70%), Gaps = 3/78 (3%) Frame = -3 Query: 226 MGEAVEIFPSNHVLSNGLDESPNE---ETNQECCWYEEVIDDDLKWSFALNSILHRGVSE 56 MGEAVEI N D SP + Q+C WYEE IDDDLKWSFALNS+LH+G SE Sbjct: 1 MGEAVEIMFGNGFPEIHKDTSPIQTLHSNQQDCHWYEETIDDDLKWSFALNSVLHQGTSE 60 Query: 55 YQEIALLDTKHFGKALVI 2 YQ+IALLDTK FGK LVI Sbjct: 61 YQDIALLDTKRFGKVLVI 78 >ref|XP_002873952.1| spermine synthase [Arabidopsis lyrata subsp. lyrata] gi|297319789|gb|EFH50211.1| spermine synthase [Arabidopsis lyrata subsp. lyrata] Length = 339 Score = 97.1 bits (240), Expect = 1e-18 Identities = 50/78 (64%), Positives = 55/78 (70%), Gaps = 3/78 (3%) Frame = -3 Query: 226 MGEAVEIFPSNHVLSNGLDESPNE---ETNQECCWYEEVIDDDLKWSFALNSILHRGVSE 56 MGEAVEI N D SP + Q+C WYEE IDDDLKWSFALNS+LH+G SE Sbjct: 1 MGEAVEIMFGNGFPEIHKDTSPIQTLHSNQQDCHWYEETIDDDLKWSFALNSVLHQGTSE 60 Query: 55 YQEIALLDTKHFGKALVI 2 YQ+IALLDTK FGK LVI Sbjct: 61 YQDIALLDTKRFGKVLVI 78