BLASTX nr result

ID: Coptis21_contig00034106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034106
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281111.1| PREDICTED: thermospermine synthase ACAULIS5 ...   105   3e-21
emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera]   105   3e-21
dbj|BAK61861.1| spermidine synthase [Citrus unshiu]                    97   1e-18
dbj|BAB83654.1| spermine synthase [Arabidopsis halleri subsp. ge...    97   1e-18
ref|XP_002873952.1| spermine synthase [Arabidopsis lyrata subsp....    97   1e-18

>ref|XP_002281111.1| PREDICTED: thermospermine synthase ACAULIS5 [Vitis vinifera]
           gi|296081702|emb|CBI20707.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/76 (67%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226 MGEAVEIFPSNHVLSNGLDESPNE-ETNQECCWYEEVIDDDLKWSFALNSILHRGVSEYQ 50
           MGEAVE + SN V     +ES  + + N  CCWYEEVIDD+LKWSFALNS+LH+G S+YQ
Sbjct: 1   MGEAVEFYHSNGVSGINHNESGKKIDENHMCCWYEEVIDDNLKWSFALNSVLHKGTSQYQ 60

Query: 49  EIALLDTKHFGKALVI 2
           +I LLDTKHFGKALVI
Sbjct: 61  DIVLLDTKHFGKALVI 76


>emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera]
          Length = 456

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/76 (67%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226 MGEAVEIFPSNHVLSNGLDESPNE-ETNQECCWYEEVIDDDLKWSFALNSILHRGVSEYQ 50
           MGEAVE + SN V     +ES  + + N  CCWYEEVIDD+LKWSFALNS+LH+G S+YQ
Sbjct: 1   MGEAVEFYHSNGVSGINHNESGKKIDENHMCCWYEEVIDDNLKWSFALNSVLHKGTSQYQ 60

Query: 49  EIALLDTKHFGKALVI 2
           +I LLDTKHFGKALVI
Sbjct: 61  DIVLLDTKHFGKALVI 76


>dbj|BAK61861.1| spermidine synthase [Citrus unshiu]
          Length = 339

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/74 (64%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = -3

Query: 220 EAVEIFPSNHVLSNGLDESPNEETN-QECCWYEEVIDDDLKWSFALNSILHRGVSEYQEI 44
           EAVEI   N       D  PN   N Q+CCW+EEVIDDDLKWSFALN +LH+G SE+Q+I
Sbjct: 4   EAVEILFENGFSKVSNDTDPNINGNLQDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDI 63

Query: 43  ALLDTKHFGKALVI 2
           ALLDTK FGK LVI
Sbjct: 64  ALLDTKRFGKVLVI 77


>dbj|BAB83654.1| spermine synthase [Arabidopsis halleri subsp. gemmifera]
          Length = 339

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/78 (64%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
 Frame = -3

Query: 226 MGEAVEIFPSNHVLSNGLDESPNE---ETNQECCWYEEVIDDDLKWSFALNSILHRGVSE 56
           MGEAVEI   N       D SP +      Q+C WYEE IDDDLKWSFALNS+LH+G SE
Sbjct: 1   MGEAVEIMFGNGFPEIHKDTSPIQTLHSNQQDCHWYEETIDDDLKWSFALNSVLHQGTSE 60

Query: 55  YQEIALLDTKHFGKALVI 2
           YQ+IALLDTK FGK LVI
Sbjct: 61  YQDIALLDTKRFGKVLVI 78


>ref|XP_002873952.1| spermine synthase [Arabidopsis lyrata subsp. lyrata]
           gi|297319789|gb|EFH50211.1| spermine synthase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 339

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/78 (64%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
 Frame = -3

Query: 226 MGEAVEIFPSNHVLSNGLDESPNE---ETNQECCWYEEVIDDDLKWSFALNSILHRGVSE 56
           MGEAVEI   N       D SP +      Q+C WYEE IDDDLKWSFALNS+LH+G SE
Sbjct: 1   MGEAVEIMFGNGFPEIHKDTSPIQTLHSNQQDCHWYEETIDDDLKWSFALNSVLHQGTSE 60

Query: 55  YQEIALLDTKHFGKALVI 2
           YQ+IALLDTK FGK LVI
Sbjct: 61  YQDIALLDTKRFGKVLVI 78


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