BLASTX nr result

ID: Coptis21_contig00034074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034074
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314660.1| beta-ketoacyl-coa synthase family protein [P...    81   1e-13
ref|XP_002312562.1| beta-ketoacyl-coa synthase family protein [P...    80   2e-13
ref|XP_003536202.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [...    80   2e-13
gb|AFK39024.1| unknown [Medicago truncatula]                           79   6e-13
ref|XP_003519009.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [...    79   6e-13

>ref|XP_002314660.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa]
           gi|222863700|gb|EEF00831.1| beta-ketoacyl-coa synthase
           family protein [Populus trichocarpa]
          Length = 524

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
 Frame = +1

Query: 319 MEEKQQKQINTSVSIRVPPSS-----KTIFPDFLQSVKLKYVKLGYHYLVSHAMYLLLIP 483
           M E Q KQ     S+ V  S      +   P+FL SVKLKYVKLGYHYL+S+AM+LLLIP
Sbjct: 1   MAEDQSKQRLGPESVTVHDSEPAETKRNTLPNFLLSVKLKYVKLGYHYLISNAMFLLLIP 60

Query: 484 LLVVASAHISTLSVNDLTE 540
           LL +ASAH+STL++ D  +
Sbjct: 61  LLFIASAHLSTLTIQDFVQ 79


>ref|XP_002312562.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa]
           gi|222852382|gb|EEE89929.1| beta-ketoacyl-coa synthase
           family protein [Populus trichocarpa]
          Length = 520

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = +1

Query: 319 MEEKQQKQINTSVSIRVPPSSK-TIFPDFLQSVKLKYVKLGYHYLVSHAMYLLLIPLLVV 495
           M E Q KQ     S+ V   +K    P FL SV+LKYVKLGYHYL+S AMYLLL+PLL +
Sbjct: 1   MAEDQSKQKPKPESVTVDAETKRNRLPYFLLSVRLKYVKLGYHYLISSAMYLLLVPLLFI 60

Query: 496 ASAHISTLSVNDLTE 540
           ASAH+STL++ D  +
Sbjct: 61  ASAHLSTLTIRDFVQ 75


>ref|XP_003536202.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max]
          Length = 517

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = +1

Query: 352 SVSIRVPPSSKTIFPDFLQSVKLKYVKLGYHYLVSHAMYLLLIPLLVVASAHISTLSVND 531
           +VS+      +   P+FL SV+LKYVKLGYHYL+S+AMYLLLIPLL VASAH+ST+S  D
Sbjct: 10  TVSVEASSQERRKLPNFLLSVRLKYVKLGYHYLISNAMYLLLIPLLGVASAHLSTISYQD 69

Query: 532 LTE 540
           + +
Sbjct: 70  VVQ 72


>gb|AFK39024.1| unknown [Medicago truncatula]
          Length = 521

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = +1

Query: 319 MEEKQQKQINTSVSIRVPPSSKTIFPDFLQSVKLKYVKLGYHYLVSHAMYLLLIPLLVVA 498
           MEE+  +Q     S R     ++  P+FL SVKLKYVKLGYHYL+S+AMYL+LIPLL VA
Sbjct: 4   MEEQNNQQ--NHYSRRSISFERSKLPNFLISVKLKYVKLGYHYLISNAMYLVLIPLLGVA 61

Query: 499 SAHISTLSVNDLTE 540
           S H+ST S+ DL +
Sbjct: 62  SVHLSTFSIKDLIQ 75


>ref|XP_003519009.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max]
          Length = 521

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = +1

Query: 322 EEKQQKQINTSVSIR-VPPSSKTIFPDFLQSVKLKYVKLGYHYLVSHAMYLLLIPLLVVA 498
           ++K Q   + ++S+       +   P+FL SV+LKYVKLGYHY++S+AMYLLLIPLL +A
Sbjct: 3   DQKNQNPDSGTISVESAKEKRRNKLPNFLLSVRLKYVKLGYHYVISNAMYLLLIPLLGIA 62

Query: 499 SAHISTLSVNDLTE 540
           SAH+STLS+ D  +
Sbjct: 63  SAHLSTLSIKDFLQ 76


Top