BLASTX nr result

ID: Coptis21_contig00034050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034050
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80...    92   3e-17
emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]    92   3e-17
emb|CBI28554.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_004155358.1| PREDICTED: probable polygalacturonase At1g80...    85   5e-15
ref|XP_004135255.1| PREDICTED: probable polygalacturonase At1g80...    85   5e-15

>ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 462

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/70 (64%), Positives = 53/70 (75%)
 Frame = +2

Query: 2   NKIVLGNINLEKDDGTVETYCNSATGFGYGYVHPSADCLQSSDKDMHSDQKEDIEIVQPF 181
           N IV+ NINLEK DGTVETYCNSATGFGYG VHP+ADCL SSDK+   +  E+ E+ +  
Sbjct: 394 NNIVVSNINLEKKDGTVETYCNSATGFGYGTVHPAADCLSSSDKECIINNTENEELAEAI 453

Query: 182 KEDDHIHTEL 211
            E D +HTEL
Sbjct: 454 PE-DLVHTEL 462


>emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
          Length = 1052

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/70 (64%), Positives = 53/70 (75%)
 Frame = +2

Query: 2    NKIVLGNINLEKDDGTVETYCNSATGFGYGYVHPSADCLQSSDKDMHSDQKEDIEIVQPF 181
            N IV+ NINLEK DGTVETYCNSATGFGYG VHP+ADCL SSDK+   +  E+ E+ +  
Sbjct: 984  NNIVVSNINLEKKDGTVETYCNSATGFGYGTVHPAADCLSSSDKECIINNTENEELAEAI 1043

Query: 182  KEDDHIHTEL 211
             E D +HTEL
Sbjct: 1044 PE-DLVHTEL 1052


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/63 (65%), Positives = 48/63 (76%)
 Frame = +2

Query: 2    NKIVLGNINLEKDDGTVETYCNSATGFGYGYVHPSADCLQSSDKDMHSDQKEDIEIVQPF 181
            N IV+ NINLEK DGTVETYCNSATGFGYG VHP+ADCL SSDK+   +  E+ E+ +  
Sbjct: 1043 NNIVVSNINLEKKDGTVETYCNSATGFGYGTVHPAADCLSSSDKECIINNTENEELAEAI 1102

Query: 182  KED 190
             ED
Sbjct: 1103 PED 1105


>ref|XP_004155358.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
           sativus]
          Length = 610

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   NKIVLGNINLEKDDGTVETYCNSATGFGYGYVHPSADCLQSSDKDM-HSDQKE--DIEIV 172
           + I+L N+NLEK DGTVETYC++A GFGYG VHPSADCL SSD +   SDQ +  ++E V
Sbjct: 538 SNIILSNVNLEKTDGTVETYCHAAQGFGYGVVHPSADCLTSSDNNFASSDQTQVLELETV 597

Query: 173 QPFKEDDHIHTEL 211
           Q   E   +HTEL
Sbjct: 598 QLSTEQHIVHTEL 610


>ref|XP_004135255.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
           sativus]
          Length = 610

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   NKIVLGNINLEKDDGTVETYCNSATGFGYGYVHPSADCLQSSDKDM-HSDQKE--DIEIV 172
           + I+L N+NLEK DGTVETYC++A GFGYG VHPSADCL SSD +   SDQ +  ++E V
Sbjct: 538 SNIILSNVNLEKTDGTVETYCHAAQGFGYGVVHPSADCLTSSDNNFASSDQTQVLELETV 597

Query: 173 QPFKEDDHIHTEL 211
           Q   E   +HTEL
Sbjct: 598 QLSTEQHIVHTEL 610


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