BLASTX nr result

ID: Coptis21_contig00034049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034049
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]   122   3e-26
ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247...   121   7e-26
emb|CBI17905.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002519404.1| conserved hypothetical protein [Ricinus comm...   105   4e-21

>emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
          Length = 1032

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/102 (62%), Positives = 79/102 (77%), Gaps = 10/102 (9%)
 Frame = +1

Query: 1   ADLMEKVERGDVPEELRSVHFIKF*FPPVSLKFMKREDVEMKIEDLKRKVGSLVS--EGG 174
           A+LM ++ERG+VPEEL+S HF+KF F PV+L+FMKRE+VEM + DLKRKV SL S   GG
Sbjct: 272 AELMGRIERGEVPEELKSAHFVKFQFSPVTLRFMKREEVEMNLSDLKRKVDSLASGGGGG 331

Query: 175 AIIYVGDLKWTVE----ERDGDNPAG----YSSVEHLVAEIG 276
           AIIY GDLKWTVE    +RDG  P+G    Y+ ++HLVAEIG
Sbjct: 332 AIIYAGDLKWTVEAAVSDRDGGFPSGEASAYNPIDHLVAEIG 373


>ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
          Length = 1045

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/102 (62%), Positives = 78/102 (76%), Gaps = 10/102 (9%)
 Frame = +1

Query: 1   ADLMEKVERGDVPEELRSVHFIKF*FPPVSLKFMKREDVEMKIEDLKRKVGSLVS--EGG 174
           A+LM ++ERG+VPEEL+S HF+KF F PV+L+FMKRE+VEM + DLKRKV SL S   GG
Sbjct: 272 AELMGRIERGEVPEELKSAHFVKFQFSPVTLRFMKREEVEMNLSDLKRKVDSLASGGGGG 331

Query: 175 AIIYVGDLKWTVE----ERDGDNPAG----YSSVEHLVAEIG 276
           AIIY GDLKWTVE    +RDG  P G    Y+ ++HLVAEIG
Sbjct: 332 AIIYAGDLKWTVEAAVSDRDGGFPNGEASAYNPIDHLVAEIG 373


>emb|CBI17905.3| unnamed protein product [Vitis vinifera]
          Length = 974

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/102 (62%), Positives = 78/102 (76%), Gaps = 10/102 (9%)
 Frame = +1

Query: 1   ADLMEKVERGDVPEELRSVHFIKF*FPPVSLKFMKREDVEMKIEDLKRKVGSLVS--EGG 174
           A+LM ++ERG+VPEEL+S HF+KF F PV+L+FMKRE+VEM + DLKRKV SL S   GG
Sbjct: 252 AELMGRIERGEVPEELKSAHFVKFQFSPVTLRFMKREEVEMNLSDLKRKVDSLASGGGGG 311

Query: 175 AIIYVGDLKWTVE----ERDGDNPAG----YSSVEHLVAEIG 276
           AIIY GDLKWTVE    +RDG  P G    Y+ ++HLVAEIG
Sbjct: 312 AIIYAGDLKWTVEAAVSDRDGGFPNGEASAYNPIDHLVAEIG 353


>ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|222854981|gb|EEE92528.1|
           predicted protein [Populus trichocarpa]
          Length = 896

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   ADLMEKVERGDVPEELRSVHFIKF*FPPVSLKFMKREDVEMKIEDLKRKVGSLVSEGGAI 180
           A+LM ++ERG+VP EL+    I+F F PVSL+FMK+EDV+M + +LKRKV SL  E GAI
Sbjct: 181 AELMGRLERGEVPMELKQTRIIEFQFAPVSLRFMKKEDVKMNLSELKRKVDSL-GESGAI 239

Query: 181 IYVGDLKWTVEERDGDNP-AGYSSVEHLVAEIG 276
           IY GDLKW VEE  G+   +GYS V+HLV EIG
Sbjct: 240 IYTGDLKWAVEETVGNGEVSGYSPVDHLVTEIG 272


>ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
           gi|223541471|gb|EEF43021.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1008

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
 Frame = +1

Query: 4   DLMEKVERGDVPEELRSVHFIKF*FPPVSLKFMKREDVEMKIEDLKRKVGSLVSEGGAII 183
           +LM +VERG+VP EL+ + F+KF F PVSL+FMK+EDVEM I  LKRKV S + + G II
Sbjct: 272 ELMGRVERGEVPAELKQIQFVKFQFAPVSLRFMKKEDVEMNITQLKRKVDS-IGDSGVII 330

Query: 184 YVGDLKWTVEER--DGDNPAGYSSVEHLVAEIG 276
           Y GDLKWTVEE   +G+    YS V+HLVAE G
Sbjct: 331 YTGDLKWTVEESAINGE----YSPVDHLVAETG 359