BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034036
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
emb|CBI22243.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japo...   112   3e-23

>ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Brachypodium distachyon]
          Length = 571

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/87 (63%), Positives = 68/87 (78%)
 Frame = -3

Query: 263 EKDVRTWSVMIGGLAVHGLAKEALGFLSDMQRDGIDPDSVTFTHVLRACSHAGMVAEGLR 84
           +KDVRTWSVMI GLAV+GL ++AL   ++M+  G+DPDS+T T VL ACSHAGMV EG  
Sbjct: 262 DKDVRTWSVMIAGLAVNGLPRDALKLFAEMKNIGVDPDSITMTAVLSACSHAGMVDEGKM 321

Query: 83  FFDIMSEVYNVEPTIEHYGCMVDLLGR 3
           F   M   Y+++PTIEHYGC+VDLLGR
Sbjct: 322 FLHCMPIEYHLQPTIEHYGCVVDLLGR 348


>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score =  114 bits (284), Expect = 1e-23
 Identities = 49/87 (56%), Positives = 68/87 (78%)
 Frame = -3

Query: 263 EKDVRTWSVMIGGLAVHGLAKEALGFLSDMQRDGIDPDSVTFTHVLRACSHAGMVAEGLR 84
           +K V  W+ +IGGLA+HG  +EAL + + MQ+ GI+P+S+TFT +L ACSHAG+  EG  
Sbjct: 305 KKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKS 364

Query: 83  FFDIMSEVYNVEPTIEHYGCMVDLLGR 3
            F+ MS VYN++P++EHYGCMVDL+GR
Sbjct: 365 LFESMSSVYNIKPSMEHYGCMVDLMGR 391


>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/88 (56%), Positives = 67/88 (76%)
 Frame = -3

Query: 266 REKDVRTWSVMIGGLAVHGLAKEALGFLSDMQRDGIDPDSVTFTHVLRACSHAGMVAEGL 87
           REKDV TW+ ++GGLA HG A++++   ++M++  I PD +TF  VL ACSHAG V EG 
Sbjct: 304 REKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGR 363

Query: 86  RFFDIMSEVYNVEPTIEHYGCMVDLLGR 3
           ++FD+M + YN+EP I HYGCMVDLLGR
Sbjct: 364 QYFDLMRDEYNIEPNIRHYGCMVDLLGR 391


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/88 (56%), Positives = 67/88 (76%)
 Frame = -3

Query: 266 REKDVRTWSVMIGGLAVHGLAKEALGFLSDMQRDGIDPDSVTFTHVLRACSHAGMVAEGL 87
           REKDV TW+ ++GGLA HG A++++   ++M++  I PD +TF  VL ACSHAG V EG 
Sbjct: 339 REKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGR 398

Query: 86  RFFDIMSEVYNVEPTIEHYGCMVDLLGR 3
           ++FD+M + YN+EP I HYGCMVDLLGR
Sbjct: 399 QYFDLMRDEYNIEPNIRHYGCMVDLLGR 426


>gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/87 (59%), Positives = 66/87 (75%)
 Frame = -3

Query: 263 EKDVRTWSVMIGGLAVHGLAKEALGFLSDMQRDGIDPDSVTFTHVLRACSHAGMVAEGLR 84
           EKDV+TWS MI GLA HGL  E+L   S M  +G+ P+ VTF  VL AC+H G+V+EG +
Sbjct: 183 EKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKK 242

Query: 83  FFDIMSEVYNVEPTIEHYGCMVDLLGR 3
           +F  M+EV+ +EPT+EHYGCMVDLLGR
Sbjct: 243 YFRSMNEVHGIEPTVEHYGCMVDLLGR 269