BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034033
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
emb|CBI41008.3| unnamed protein product [Vitis vinifera]               77   1e-12
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]    77   1e-12

>ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Brachypodium distachyon]
          Length = 463

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/100 (38%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
 Frame = +1

Query: 49  FYRKGQSLNGDWIWDKMEGSGVVPDILSYNSKSYNSKLQGLVNVGKISEAIEFYQQLRSK 228
           FY+ G+  + + +W+ M+G  + PD     +KSYN+KL+GLV  G+I +A+   +++  +
Sbjct: 260 FYQNGRMDDAEAVWEMMKGWNLEPD-----TKSYNAKLRGLVAEGRIEDAVAVVERMEKE 314

Query: 229 -VKSTRDTYNILIKLYCNAGKLDEAKRVYDALLENDFVPN 345
             K    +YN LI+ YC+AG+L++AK++YD L++N+  PN
Sbjct: 315 GPKPDTVSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPN 354


>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13150-like [Vitis vinifera]
          Length = 379

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +1

Query: 43  DVFYRKGQSLNGDWIWDKMEGSGVVPDILSYNSKSYNSKLQGLVNVGKISEAIEFYQQLR 222
           + FY+ G   +G+ IWD M+ + V P++     +SYN+KL+G+++  ++SEA+E   +++
Sbjct: 206 NAFYQNGSYADGEKIWDLMKKNNVAPNV-----RSYNAKLRGVISENRMSEAVELIDEMK 260

Query: 223 -SKVKSTRDTYNILIKLYCNAGKLDEAKRVYDALLENDFVP 342
            S +K    T N L+K +CNAG L+EAKR Y  +  N+  P
Sbjct: 261 TSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 301


>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Vitis vinifera]
          Length = 379

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +1

Query: 43  DVFYRKGQSLNGDWIWDKMEGSGVVPDILSYNSKSYNSKLQGLVNVGKISEAIEFYQQLR 222
           + FY+ G   +G+ IWD M+ + V P++     +SYN+KL+G+++  ++SEA+E   +++
Sbjct: 206 NAFYQNGSYADGEKIWDLMKKNNVAPNV-----RSYNAKLRGVISENRMSEAVELIDEMK 260

Query: 223 -SKVKSTRDTYNILIKLYCNAGKLDEAKRVYDALLENDFVP 342
            S +K    T N L+K +CNAG L+EAKR Y  +  N+  P
Sbjct: 261 TSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 301


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +1

Query: 43  DVFYRKGQSLNGDWIWDKMEGSGVVPDILSYNSKSYNSKLQGLVNVGKISEAIEFYQQLR 222
           + FY+ G   +G+ IWD M+ + V P++     +SYN+KL+G+++  ++SEA+E   +++
Sbjct: 216 NAFYQNGSYADGEKIWDLMKKNNVAPNV-----RSYNAKLRGVISENRMSEAVELIDEMK 270

Query: 223 -SKVKSTRDTYNILIKLYCNAGKLDEAKRVYDALLENDFVP 342
            S +K    T N L+K +CNAG L+EAKR Y  +  N+  P
Sbjct: 271 TSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 311


>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
          Length = 340

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +1

Query: 43  DVFYRKGQSLNGDWIWDKMEGSGVVPDILSYNSKSYNSKLQGLVNVGKISEAIEFYQQLR 222
           + FY+ G   +G+ IWD M+ + V P++     +SYN+KL+G+++  ++SEA+E   +++
Sbjct: 167 NAFYQNGSYADGEKIWDLMKKNNVAPNV-----RSYNAKLRGVISENRMSEAVELIDEMK 221

Query: 223 -SKVKSTRDTYNILIKLYCNAGKLDEAKRVYDALLENDFVP 342
            S +K    T N L+K +CNAG L+EAKR Y  +  N+  P
Sbjct: 222 TSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 262