BLASTX nr result

ID: Coptis21_contig00034030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034030
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza...    55   8e-06
gb|ABA95236.1| AT hook motif-containing protein, putative, expre...    55   8e-06
gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japoni...    55   8e-06
gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]         55   8e-06
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]         55   8e-06

>gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
           Group]
          Length = 1618

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/55 (50%), Positives = 39/55 (70%)
 Frame = -2

Query: 233 MVSYTNKLTEN*RMARDRFKEFEVVDFSIKLISTRQKDGRLYNMPASSEVAALLL 69
           M+   N L +  RMARDRFKE +  + S++LI  R  DGR +NMP++SEVAAL++
Sbjct: 446 MLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMPSASEVAALIV 500


>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 1682

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/55 (50%), Positives = 39/55 (70%)
 Frame = -2

Query: 233 MVSYTNKLTEN*RMARDRFKEFEVVDFSIKLISTRQKDGRLYNMPASSEVAALLL 69
           M+   N L +  RMARDRFKE +  + S++LI  R  DGR +NMP++SEVAAL++
Sbjct: 446 MLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMPSASEVAALIV 500


>gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japonica Group]
          Length = 1501

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/56 (44%), Positives = 40/56 (71%)
 Frame = -2

Query: 233 MVSYTNKLTEN*RMARDRFKEFEVVDFSIKLISTRQKDGRLYNMPASSEVAALLLR 66
           M+   N L +  RMARDRFKE +  +++++L+  R +DGR  NMP++SEVA L+++
Sbjct: 316 MLDENNTLAQTFRMARDRFKEDDYHNYTLRLLDNRDQDGRQDNMPSASEVALLIVK 371


>gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]
          Length = 1517

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/56 (44%), Positives = 40/56 (71%)
 Frame = -2

Query: 233 MVSYTNKLTEN*RMARDRFKEFEVVDFSIKLISTRQKDGRLYNMPASSEVAALLLR 66
           M+   N L +  RMARDRFKE +  +++++L+  R +DGR  NMP++SEVA L+++
Sbjct: 316 MLDENNTLAQTFRMARDRFKEDDYHNYTLRLLDNRDQDGRQDNMPSASEVALLIVK 371


>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
          Length = 1634

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/55 (50%), Positives = 39/55 (70%)
 Frame = -2

Query: 233 MVSYTNKLTEN*RMARDRFKEFEVVDFSIKLISTRQKDGRLYNMPASSEVAALLL 69
           M+   N L +  RMARDRFKE +  + S++LI  R  DGR +NMP++SEVAAL++
Sbjct: 398 MLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMPSASEVAALIV 452


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