BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034023
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   110   1e-22
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   100   1e-19

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/113 (50%), Positives = 80/113 (70%)
 Frame = +1

Query: 4   KDFESVERVLEEMKEAGVKCDWTVYTNLASIFIKEGLSDKANLALKEVENMEKLRNRKAY 183
           KDFE+VE+VLE+MK+ GV+ DW  Y NLA+I++  G + KAN AL+++E  + L + +A+
Sbjct: 213 KDFEAVEQVLEKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAF 272

Query: 184 HLLLTMYSSVSNKIGVYRVWESLKLNFPETTNNGSYLVMLQALSTLGETEELE 342
            +L+ +Y+  SN  GV R WESLKL  P+  NN SYL+ML ALS LG+   LE
Sbjct: 273 RMLINLYARTSNLEGVNRAWESLKLAHPK-INNKSYLIMLLALSKLGDVAGLE 324


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial [Vitis vinifera]
           gi|296089781|emb|CBI39600.3| unnamed protein product
           [Vitis vinifera]
          Length = 498

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/113 (49%), Positives = 80/113 (70%)
 Frame = +1

Query: 4   KDFESVERVLEEMKEAGVKCDWTVYTNLASIFIKEGLSDKANLALKEVENMEKLRNRKAY 183
           KDFE+VE+VL++MK+ GV+ DW  Y NLA+I++  G + KAN AL+++E  + L + +A+
Sbjct: 217 KDFEAVEQVLDKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAF 276

Query: 184 HLLLTMYSSVSNKIGVYRVWESLKLNFPETTNNGSYLVMLQALSTLGETEELE 342
            +L+ +Y+  SN  GV R WESLKL  P+  NN SYL+ML ALS LG+   LE
Sbjct: 277 RMLINLYARTSNLEGVNRAWESLKLAHPK-INNKSYLIMLLALSKLGDVAGLE 328


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/112 (54%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
 Frame = +1

Query: 7   DFESVERVLEEMKEAGVK-CDWTVYTNLASIFIKEGLSDKANLALKEVENMEKLRNRKAY 183
           DFE VERVL+EMK  G K   WT YTNLA+I++K G  DKA  ALK+VE   +   R+AY
Sbjct: 195 DFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERDYREAY 254

Query: 184 HLLLTMYSSVSNKIGVYRVWESLKLNFPETTNNGSYLVMLQALSTLGETEEL 339
           H L+T+Y+  SN   V RVW SLK NF  TT N SYL ML  L+ L + E L
Sbjct: 255 HFLITLYAGTSNLGEVNRVWNSLKSNF-HTTTNVSYLTMLHTLAKLKDVEGL 305


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Glycine max]
          Length = 490

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
 Frame = +1

Query: 7   DFESVERVLEEMKEAG-VKCDWTVYTNLASIFIKEGLSDKANLALKEVENMEKLRNRKAY 183
           D   VERV +EMK  G V  DWT Y+NLASIF+  GL DKA +ALKE+E     ++  AY
Sbjct: 208 DISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEKRNAFKDLTAY 267

Query: 184 HLLLTMYSSVSNKIGVYRVWESLKLNFPETTNNGSYLVMLQALSTL 321
             L+T+Y    N   VYRVW SL+L FP+T N  SYL M+Q L  L
Sbjct: 268 QFLITLYGRTGNLYEVYRVWRSLRLAFPKTANI-SYLNMIQVLVNL 312


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/113 (46%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
 Frame = +1

Query: 7   DFESVERVLEEMK-EAGVKCDWTVYTNLASIFIKEGLSDKANLALKEVENMEKLRNRKAY 183
           D E  ERVLEE+K E   K  WT Y+NLA++++   L +KA LALK++E      +R AY
Sbjct: 229 DIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAY 288

Query: 184 HLLLTMYSSVSNKIGVYRVWESLKLNFPETTNNGSYLVMLQALSTLGETEELE 342
           H L+++Y+ ++N   V RVW SLK  FP+ TNN SY +MLQAL+ L + + L+
Sbjct: 289 HFLISLYAGINNLSEVNRVWNSLKSAFPK-TNNMSYFIMLQALANLNDVDGLK 340