BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033926
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   129   2e-28
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   126   2e-27
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   124   8e-27

>ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|222866256|gb|EEF03387.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/98 (64%), Positives = 80/98 (81%)
 Frame = +3

Query: 3   IIKIAMINIHSVIADECEKSDATLKYGKQFSMLKGRCRLLLQVHDELVLEVDPCLIREAG 182
           +IKIAMINIHS+I D   + +++  +  +F MLKG+CR+LLQVHDELVLEVDP LI EA 
Sbjct: 540 LIKIAMINIHSLIVDGVGRPESSSLHANKFHMLKGQCRILLQVHDELVLEVDPSLINEAA 599

Query: 183 LLLRMSMENAVSLLVPLHAKLMVGKTWGSLETFMAEDY 296
           +LL+MSME+A SLLVPLH KL VG+TWGSLE F+A+ +
Sbjct: 600 VLLQMSMEDAASLLVPLHVKLKVGRTWGSLEPFLADQH 637


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/96 (66%), Positives = 81/96 (84%)
 Frame = +3

Query: 3    IIKIAMINIHSVIADECEKSDATLKYGKQFSMLKGRCRLLLQVHDELVLEVDPCLIREAG 182
            IIKIAMINIHSVIA+  ++ +++ +   +F MLKGRCR++LQVHDELVLEVDP +++EAG
Sbjct: 2073 IIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVLEVDPSVMKEAG 2132

Query: 183  LLLRMSMENAVSLLVPLHAKLMVGKTWGSLETFMAE 290
            LLL+M+MEN+ SLLVPL  KL VG+TWGSLE F AE
Sbjct: 2133 LLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPFHAE 2168


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/96 (66%), Positives = 81/96 (84%)
 Frame = +3

Query: 3    IIKIAMINIHSVIADECEKSDATLKYGKQFSMLKGRCRLLLQVHDELVLEVDPCLIREAG 182
            IIKIAMINIHSVIA+  ++ +++ +   +F MLKGRCR++LQVHDELVLEVDP +++EAG
Sbjct: 1983 IIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVLEVDPSVMKEAG 2042

Query: 183  LLLRMSMENAVSLLVPLHAKLMVGKTWGSLETFMAE 290
            LLL+M+MEN+ SLLVPL  KL VG+TWGSLE F AE
Sbjct: 2043 LLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPFHAE 2078


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/96 (65%), Positives = 77/96 (80%)
 Frame = +3

Query: 3    IIKIAMINIHSVIADECEKSDATLKYGKQFSMLKGRCRLLLQVHDELVLEVDPCLIREAG 182
            IIKIAMINI+S IA++ + + ++     +F MLKGRCR+LLQVHDELVLEVDP  ++ A 
Sbjct: 2052 IIKIAMINIYSAIAEDVDTTASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKVAA 2111

Query: 183  LLLRMSMENAVSLLVPLHAKLMVGKTWGSLETFMAE 290
            +LL+ SMENAVSLLVPLH KL VGKTWGSLE F A+
Sbjct: 2112 MLLQTSMENAVSLLVPLHVKLKVGKTWGSLEPFQAD 2147


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/96 (64%), Positives = 76/96 (79%)
 Frame = +3

Query: 3    IIKIAMINIHSVIADECEKSDATLKYGKQFSMLKGRCRLLLQVHDELVLEVDPCLIREAG 182
            IIKIAMINI+S IA++ + + ++     +F MLKGRCR+LLQVHDELVLEVDP  ++ A 
Sbjct: 2059 IIKIAMINIYSAIAEDVDTAASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKLAA 2118

Query: 183  LLLRMSMENAVSLLVPLHAKLMVGKTWGSLETFMAE 290
            +LL+ SMENAVSLLVPLH KL VGKTWGSLE F  +
Sbjct: 2119 MLLQTSMENAVSLLVPLHVKLKVGKTWGSLEPFQTD 2154