BLASTX nr result
ID: Coptis21_contig00033871
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033871 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273892.2| PREDICTED: uncharacterized protein LOC100257... 84 2e-14 emb|CAN68197.1| hypothetical protein VITISV_039761 [Vitis vinifera] 84 2e-14 ref|XP_002306281.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 ref|XP_002873382.1| hypothetical protein ARALYDRAFT_908857 [Arab... 74 2e-11 ref|XP_003602686.1| hypothetical protein MTR_3g096940 [Medicago ... 72 5e-11 >ref|XP_002273892.2| PREDICTED: uncharacterized protein LOC100257607 [Vitis vinifera] Length = 313 Score = 83.6 bits (205), Expect = 2e-14 Identities = 41/68 (60%), Positives = 49/68 (72%) Frame = -3 Query: 248 WDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGPSLVSGNFGSTYPVSVYLYR 69 WDCSSLSLFSR+SGDRI +ME F L G GW++FKTK PSL SG S YL+R Sbjct: 197 WDCSSLSLFSRISGDRIQTMEGFCRALTGVGWSLFKTKKNPSLDSGGRRIRGCNSAYLFR 256 Query: 68 KVDSSRVK 45 KV+S+RV+ Sbjct: 257 KVESNRVR 264 >emb|CAN68197.1| hypothetical protein VITISV_039761 [Vitis vinifera] Length = 313 Score = 83.6 bits (205), Expect = 2e-14 Identities = 41/68 (60%), Positives = 49/68 (72%) Frame = -3 Query: 248 WDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGPSLVSGNFGSTYPVSVYLYR 69 WDCSSLSLFSR+SGDRI +ME F L G GW++FKTK PSL SG S YL+R Sbjct: 197 WDCSSLSLFSRISGDRIQTMEGFCRALTGVGWSLFKTKKNPSLDSGGRRIRGCNSAYLFR 256 Query: 68 KVDSSRVK 45 KV+S+RV+ Sbjct: 257 KVESNRVR 264 >ref|XP_002306281.1| predicted protein [Populus trichocarpa] gi|222855730|gb|EEE93277.1| predicted protein [Populus trichocarpa] Length = 304 Score = 73.9 bits (180), Expect = 1e-11 Identities = 38/70 (54%), Positives = 47/70 (67%) Frame = -3 Query: 248 WDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGPSLVSGNFGSTYPVSVYLYR 69 WDC S SLF R++GDRI+SM++FS L G GWT+FKTK + G GS VYL+R Sbjct: 196 WDCCSFSLFWRLTGDRIDSMDKFSRALAGVGWTLFKTKENNTPSDGIGGSK---MVYLFR 252 Query: 68 KVDSSRVKIV 39 KVDS V +V Sbjct: 253 KVDSKPVYVV 262 >ref|XP_002873382.1| hypothetical protein ARALYDRAFT_908857 [Arabidopsis lyrata subsp. lyrata] gi|297319219|gb|EFH49641.1| hypothetical protein ARALYDRAFT_908857 [Arabidopsis lyrata subsp. lyrata] Length = 296 Score = 73.6 bits (179), Expect = 2e-11 Identities = 35/71 (49%), Positives = 50/71 (70%) Frame = -3 Query: 260 NINIWDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGPSLVSGNFGSTYPVSV 81 +++ WDC S+SLFSR++ RI SME FS+ L +GWT++KTK PS S + G + SV Sbjct: 186 SVSNWDCCSVSLFSRIANKRIGSMESFSNALASKGWTIYKTKENPSPESTSNGGS---SV 242 Query: 80 YLYRKVDSSRV 48 YL+RKV + R+ Sbjct: 243 YLFRKVYTGRI 253 >ref|XP_003602686.1| hypothetical protein MTR_3g096940 [Medicago truncatula] gi|355491734|gb|AES72937.1| hypothetical protein MTR_3g096940 [Medicago truncatula] Length = 273 Score = 72.0 bits (175), Expect = 5e-11 Identities = 35/72 (48%), Positives = 49/72 (68%) Frame = -3 Query: 257 INIWDCSSLSLFSRVSGDRINSMERFSSVLVGRGWTMFKTKNGPSLVSGNFGSTYPVSVY 78 ++ WDC S+SL SRV+G R+++ME F +L G+GWT FKTK PS+ G VY Sbjct: 163 VSNWDCCSVSLCSRVTGIRVDTMEGFCRILAGKGWTFFKTKENPSVDHCGGG-----VVY 217 Query: 77 LYRKVDSSRVKI 42 L+RKVD +RV++ Sbjct: 218 LFRKVDVNRVRV 229