BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033704
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_002330195.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
emb|CBI39592.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_003609027.1| Pentatricopeptide repeat-containing protein ...   135   3e-30

>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
           gi|449524964|ref|XP_004169491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/127 (63%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379 FVK-KSNDSISSIFHTISVLACSRYGVSISIDMFILAYTKNEKISLALEAFERAGDYRYR 203
           FVK ++N SIS IFH++SV +      SI  DM +LAY +N K  L LEAF+RAGDYRY+
Sbjct: 133 FVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYK 192

Query: 202 LSVVSCNPLLNALVKKNEIENAEGVYKEMIRRRVELDLFSFNTMINGYCKVGKLNKAGDL 23
           LSV+SCNPLL+ALVK+NE    E VYKEMIRR++  +L +FNT+ING CKVGKLNKAGD+
Sbjct: 193 LSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV 252

Query: 22  VEDMKVW 2
           V+DMKVW
Sbjct: 253 VDDMKVW 259



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/97 (28%), Positives = 58/97 (59%)
 Frame = -1

Query: 301 SISIDMFILAYTKNEKISLALEAFERAGDYRYRLSVVSCNPLLNALVKKNEIENAEGVYK 122
           S++ ++ I  + K+E +S AL+ FE       + +VV+ N L+N L  + ++  A+ +  
Sbjct: 303 SVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLD 362

Query: 121 EMIRRRVELDLFSFNTMINGYCKVGKLNKAGDLVEDM 11
           EM+   ++ ++ ++N +INGYCK   L +A +L +++
Sbjct: 363 EMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399


>ref|XP_002330195.1| predicted protein [Populus trichocarpa] gi|222871651|gb|EEF08782.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/127 (55%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379 FVKKSND-SISSIFHTISVLACSRYGVSISIDMFILAYTKNEKISLALEAFERAGDYRYR 203
           FVK   D S+S+IFH IS+   S    SI  DM +LA+ +N KI    EAF+RAGDY ++
Sbjct: 58  FVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFK 117

Query: 202 LSVVSCNPLLNALVKKNEIENAEGVYKEMIRRRVELDLFSFNTMINGYCKVGKLNKAGDL 23
           LS++SCNPLL+ LVK++E  + E VY+EMI+R++EL++ SFN ++NG CKVGKLN+AGD+
Sbjct: 118 LSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177

Query: 22  VEDMKVW 2
           +EDMKVW
Sbjct: 178 IEDMKVW 184


>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/126 (54%), Positives = 92/126 (73%)
 Frame = -1

Query: 379 FVKKSNDSISSIFHTISVLACSRYGVSISIDMFILAYTKNEKISLALEAFERAGDYRYRL 200
           F K ++ S S+IFH++SVL       SI +DM + AY KN ++ LALE F+RAGDY +RL
Sbjct: 133 FAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRL 192

Query: 199 SVVSCNPLLNALVKKNEIENAEGVYKEMIRRRVELDLFSFNTMINGYCKVGKLNKAGDLV 20
           S +SCNP+L +LVK+  I   E VYKEMIRRR+ +++ +F+ +ING CKVGK  KAGD+V
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVV 252

Query: 19  EDMKVW 2
           EDMK W
Sbjct: 253 EDMKAW 258


>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/126 (54%), Positives = 92/126 (73%)
 Frame = -1

Query: 379 FVKKSNDSISSIFHTISVLACSRYGVSISIDMFILAYTKNEKISLALEAFERAGDYRYRL 200
           F K ++ S S+IFH++SVL       SI +DM + AY KN ++ LALE F+RAGDY +RL
Sbjct: 133 FAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRL 192

Query: 199 SVVSCNPLLNALVKKNEIENAEGVYKEMIRRRVELDLFSFNTMINGYCKVGKLNKAGDLV 20
           S +SCNP+L +LVK+  I   E VYKEMIRRR+ +++ +F+ +ING CKVGK  KAGD+V
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVV 252

Query: 19  EDMKVW 2
           EDMK W
Sbjct: 253 EDMKAW 258


>ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510082|gb|AES91224.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/126 (51%), Positives = 89/126 (70%)
 Frame = -1

Query: 379 FVKKSNDSISSIFHTISVLACSRYGVSISIDMFILAYTKNEKISLALEAFERAGDYRYRL 200
           FVK    ++SS+FH++ +        ++ IDM +LAY KN ++  A EAF RA DY ++L
Sbjct: 104 FVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKL 163

Query: 199 SVVSCNPLLNALVKKNEIENAEGVYKEMIRRRVELDLFSFNTMINGYCKVGKLNKAGDLV 20
           S+ SCNPLL+ALVK+N+I + E VYKEMI+RR+  +L +FN  ING C+ GKLNKA D +
Sbjct: 164 SLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAI 223

Query: 19  EDMKVW 2
           EDMK W
Sbjct: 224 EDMKAW 229