BLASTX nr result

ID: Coptis21_contig00033651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033651
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW64739.1| hypothetical protein ZEAMMB73_823834 [Zea mays]         73   3e-11
ref|XP_002323246.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_003632742.1| PREDICTED: uncharacterized protein LOC100854...    71   8e-11
emb|CBX25341.1| hypothetical_protein [Oryza brachyantha]               70   1e-10
emb|CBX25243.1| hypothetical_protein [Oryza brachyantha]               70   1e-10

>gb|AFW64739.1| hypothetical protein ZEAMMB73_823834 [Zea mays]
          Length = 62

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/37 (83%), Positives = 32/37 (86%)
 Frame = +3

Query: 177 PHRTRPMASLLVFMGVNLVLFTTITPVYDFVCFLPYW 287
           PHR RPM  LLVFMGVNL LF TITPVYDFVCFLP+W
Sbjct: 2   PHRARPMTGLLVFMGVNLALFNTITPVYDFVCFLPHW 38


>ref|XP_002323246.1| predicted protein [Populus trichocarpa] gi|222867876|gb|EEF05007.1|
           predicted protein [Populus trichocarpa]
          Length = 58

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 177 PHRTRPMASLLVFMGVNLVLFTTITPVYDFVCFLPYW 287
           PHRTRPM +LLVF G+N+VL +TITPVYDFVCFLPYW
Sbjct: 2   PHRTRPMTALLVFSGINVVLVSTITPVYDFVCFLPYW 38


>ref|XP_003632742.1| PREDICTED: uncharacterized protein LOC100854042 [Vitis vinifera]
          Length = 59

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 177 PHRTRPMASLLVFMGVNLVLFTTITPVYDFVCFLPYW 287
           PHRTRPM +LLVF G+N+VL +TITPVYDFVCFLPYW
Sbjct: 2   PHRTRPMTALLVFTGLNVVLASTITPVYDFVCFLPYW 38


>emb|CBX25341.1| hypothetical_protein [Oryza brachyantha]
          Length = 62

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/55 (60%), Positives = 34/55 (61%)
 Frame = +3

Query: 177 PHRTRPMASLLVFMGVNLVLFTTITPVYDFVCFLPYWXXXXXXXXXXXXAASRNG 341
           PHR RPM  LLVFMGVNLVL  TI+PVYDFVCF PYW            A   NG
Sbjct: 2   PHRARPMTGLLVFMGVNLVLLNTISPVYDFVCFHPYWERRRERLQKEREALQANG 56


>emb|CBX25243.1| hypothetical_protein [Oryza brachyantha]
          Length = 62

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/55 (60%), Positives = 34/55 (61%)
 Frame = +3

Query: 177 PHRTRPMASLLVFMGVNLVLFTTITPVYDFVCFLPYWXXXXXXXXXXXXAASRNG 341
           PHR RPM  LLVFMGVNLVL  TI+PVYDFVCF PYW            A   NG
Sbjct: 2   PHRARPMTGLLVFMGVNLVLLNTISPVYDFVCFHPYWERWRERRQKEREALQANG 56


Top