BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033628
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...    65   3e-24
emb|CBI17093.3| unnamed protein product [Vitis vinifera]               65   3e-24
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...    65   3e-24
ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricin...    64   1e-23
ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thal...    62   1e-22

>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score = 65.1 bits (157), Expect(3) = 3e-24
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = -3

Query: 229 SYFWPLSCLKTINKQDLITAPSDSRFRIDVEKNWAESSKVAVLLHELK 86
           S F P+ C KTI++QDLITAP+ SRF+IDVEKNW ESSKVA LL EL+
Sbjct: 827 SGFCPV-CRKTISRQDLITAPTGSRFQIDVEKNWMESSKVAALLLELE 873



 Score = 55.1 bits (131), Expect(3) = 3e-24
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -2

Query: 89  QNLCSSGSKSIVFSQWTTFLDLLQIPLSR 3
           +NLCS GSKSI+FSQWT FLDLLQIPLSR
Sbjct: 873 ENLCSVGSKSILFSQWTAFLDLLQIPLSR 901



 Score = 36.6 bits (83), Expect(3) = 3e-24
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 258 RECLLASWKNRTSGLCP 208
           RECLLASW+N TSG CP
Sbjct: 815 RECLLASWRNPTSGFCP 831


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score = 65.1 bits (157), Expect(3) = 3e-24
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = -3

Query: 229 SYFWPLSCLKTINKQDLITAPSDSRFRIDVEKNWAESSKVAVLLHELK 86
           S F P+ C KTI++QDLITAP+ SRF+IDVEKNW ESSKVA LL EL+
Sbjct: 823 SGFCPV-CRKTISRQDLITAPTGSRFQIDVEKNWMESSKVAALLLELE 869



 Score = 55.1 bits (131), Expect(3) = 3e-24
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -2

Query: 89  QNLCSSGSKSIVFSQWTTFLDLLQIPLSR 3
           +NLCS GSKSI+FSQWT FLDLLQIPLSR
Sbjct: 869 ENLCSVGSKSILFSQWTAFLDLLQIPLSR 897



 Score = 36.6 bits (83), Expect(3) = 3e-24
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 258 RECLLASWKNRTSGLCP 208
           RECLLASW+N TSG CP
Sbjct: 811 RECLLASWRNPTSGFCP 827


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like isoform 2 [Vitis vinifera]
          Length = 1016

 Score = 65.1 bits (157), Expect(3) = 3e-24
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = -3

Query: 229 SYFWPLSCLKTINKQDLITAPSDSRFRIDVEKNWAESSKVAVLLHELK 86
           S F P+ C KTI++QDLITAP+ SRF+IDVEKNW ESSKVA LL EL+
Sbjct: 814 SGFCPV-CRKTISRQDLITAPTGSRFQIDVEKNWMESSKVAALLLELE 860



 Score = 55.1 bits (131), Expect(3) = 3e-24
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -2

Query: 89  QNLCSSGSKSIVFSQWTTFLDLLQIPLSR 3
           +NLCS GSKSI+FSQWT FLDLLQIPLSR
Sbjct: 860 ENLCSVGSKSILFSQWTAFLDLLQIPLSR 888



 Score = 36.6 bits (83), Expect(3) = 3e-24
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 258 RECLLASWKNRTSGLCP 208
           RECLLASW+N TSG CP
Sbjct: 802 RECLLASWRNPTSGFCP 818


>ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1028

 Score = 63.5 bits (153), Expect(3) = 1e-23
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -3

Query: 208 CLKTINKQDLITAPSDSRFRIDVEKNWAESSKVAVLLHELK 86
           C K + +Q+LITAP+DSRF+ID+EKNW ESSKV VLL EL+
Sbjct: 832 CRKIVTRQELITAPTDSRFQIDIEKNWVESSKVIVLLQELE 872



 Score = 52.8 bits (125), Expect(3) = 1e-23
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -2

Query: 89  QNLCSSGSKSIVFSQWTTFLDLLQIPLSR 3
           +NL SSGSKSI+FSQWT FLDLLQIPLSR
Sbjct: 872 ENLRSSGSKSILFSQWTAFLDLLQIPLSR 900



 Score = 38.5 bits (88), Expect(3) = 1e-23
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 258 RECLLASWKNRTSGLCP 208
           RECLLASW+N TSGLCP
Sbjct: 814 RECLLASWRNSTSGLCP 830


>ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
           gi|60390961|sp|Q9FNI6.1|SM3L2_ARATH RecName:
           Full=Putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2; Short=SMARCA3-like protein 2
           gi|10178249|dbj|BAB11681.1| DNA repair protein RAD5
           protein [Arabidopsis thaliana]
           gi|110737306|dbj|BAF00599.1| hypothetical protein
           [Arabidopsis thaliana] gi|332005687|gb|AED93070.1|
           DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
          Length = 1029

 Score = 62.4 bits (150), Expect(3) = 1e-22
 Identities = 26/41 (63%), Positives = 35/41 (85%)
 Frame = -3

Query: 208 CLKTINKQDLITAPSDSRFRIDVEKNWAESSKVAVLLHELK 86
           C  T++KQ+LITAP++SRF++DVEKNW ESSK+  LL EL+
Sbjct: 833 CRNTVSKQELITAPTESRFQVDVEKNWVESSKITALLEELE 873



 Score = 50.4 bits (119), Expect(3) = 1e-22
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = -2

Query: 89  QNLCSSGSKSIVFSQWTTFLDLLQIPLSR 3
           + L SSGSKSI+FSQWT FLDLLQIPLSR
Sbjct: 873 EGLRSSGSKSILFSQWTAFLDLLQIPLSR 901



 Score = 38.5 bits (88), Expect(3) = 1e-22
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 258 RECLLASWKNRTSGLCP 208
           RECLLASW+N TSGLCP
Sbjct: 815 RECLLASWRNSTSGLCP 831