BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033618
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              119   3e-25
gb|ACN32036.1| unknown [Zea mays]                                      83   5e-14
gb|ACL54615.1| unknown [Zea mays]                                      83   5e-14
ref|XP_002297954.1| predicted protein [Populus trichocarpa] gi|2...    80   3e-13

>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  155 bits (393), Expect = 4e-36
 Identities = 76/99 (76%), Positives = 84/99 (84%)
 Frame = -3

Query: 316 FMSIKLDRTNYFLWLAQIAPILKSKNLIGFVGGTNPSPSEFKRDAKGAVTTEVDLEFAAW 137
           FMSIKLDRTNY LWLAQI PILKSKNL+GFV GTNP P EFK +  G +TTEVD  +A W
Sbjct: 18  FMSIKLDRTNYPLWLAQIVPILKSKNLMGFVTGTNPCPPEFKSNTDGTITTEVDPRYATW 77

Query: 136 NQQDQMILSWINSSLTPLVLSTVARFTSSRDTWISLEKR 20
           +QQDQMILSWIN+SL+P VLSTVARFTSS+ TW SLEKR
Sbjct: 78  HQQDQMILSWINNSLSPTVLSTVARFTSSQATWSSLEKR 116


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  119 bits (299), Expect = 3e-25
 Identities = 61/99 (61%), Positives = 71/99 (71%)
 Frame = -3

Query: 316 FMSIKLDRTNYFLWLAQIAPILKSKNLIGFVGGTNPSPSEFKRDAKGAVTTEVDLEFAAW 137
           F++IKLDRTNY LWLAQI PILKS+ L GFV GTN  P  F +D  G +T +V+ +F  W
Sbjct: 16  FLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLKDKAGQLTDQVNPDFEPW 75

Query: 136 NQQDQMILSWINSSLTPLVLSTVARFTSSRDTWISLEKR 20
             QDQM+LSWIN SLTP VLSTVAR TS   TW +L  R
Sbjct: 76  ILQDQMVLSWINGSLTPKVLSTVARSTSLHATWTALATR 114


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
 Frame = -3

Query: 313 MSIKLDRTNYFLWLAQIAPILKSKNLIGFVGGTNPSPSEF----KRDAKGAVTTEVDLEF 146
           +S+KL+  NY LW+AQ+ P L+S+ L G + G+ P+P +       +  G  T  ++ EF
Sbjct: 26  VSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPAPRQTVAVDPAEGSGGRTIAINPEF 85

Query: 145 AAWNQQDQMILSWINSSLTPLVLSTVARFTSSRDTWISLEK 23
            +W  QDQ++LS INSSL+  VL+TV   T++R  W +LE+
Sbjct: 86  TSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLER 126


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
 Frame = -3

Query: 313 MSIKLDRTNYFLWLAQIAPILKSKNLIGFVGGTNPSPSEF----KRDAKGAVTTEVDLEF 146
           +S+KL+  NY LW+AQ+ P L+S+ L G + G+ P+P +       +  G  T  ++ EF
Sbjct: 26  VSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPAPRQTVAVDPAEGSGGRTIAINPEF 85

Query: 145 AAWNQQDQMILSWINSSLTPLVLSTVARFTSSRDTWISLEK 23
            +W  QDQ++LS INSSL+  VL+TV   T++R  W +LE+
Sbjct: 86  TSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLER 126


>ref|XP_002297954.1| predicted protein [Populus trichocarpa] gi|222845212|gb|EEE82759.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 44/98 (44%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = -3

Query: 316 FMSIKLDRTNYFLWLAQIAPILKSKNLIGFVGGTNPSP-SEFKRDAKGAVTTEVDLEFAA 140
           F  +KL R NY LWL QI P L+  NL G+V GT P P S       G   T  +  F  
Sbjct: 21  FNPVKLTRDNYPLWLPQIVPHLRGGNLFGYVDGTTPPPPSTVSSTIDGVTITSPNPAFLH 80

Query: 139 WNQQDQMILSWINSSLTPLVLSTVARFTSSRDTWISLE 26
           W  QDQ+IL  INS+LT  +L+ V R T++R  W +LE
Sbjct: 81  WTIQDQIILGAINSTLTEKMLTHVTRCTTTRSAWTTLE 118