BLASTX nr result

ID: Coptis21_contig00033579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033579
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623542.1| Carboxyl-terminal proteinase [Medicago trunc...    72   5e-11
ref|XP_002531705.1| conserved hypothetical protein [Ricinus comm...    71   1e-10
gb|AFK34107.1| unknown [Medicago truncatula]                           70   1e-10
ref|XP_003595856.1| hypothetical protein MTR_2g062610 [Medicago ...    70   1e-10
ref|XP_003595855.1| hypothetical protein MTR_2g062610 [Medicago ...    70   1e-10

>ref|XP_003623542.1| Carboxyl-terminal proteinase [Medicago truncatula]
           gi|355498557|gb|AES79760.1| Carboxyl-terminal proteinase
           [Medicago truncatula]
          Length = 205

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
 Frame = -2

Query: 376 NWWLTIPDKSINIGYWPNTILPHLAEGANNVAWGGLAMASANGDSPVMGFGIFPDGNYMH 197
           +WWL +  +SI IGYWP  I  HL EGA+ + +GG   A  N D P MG G FP    ++
Sbjct: 91  HWWLYVQRESIRIGYWPKEIFTHLREGASKIRFGGQTYAPPNKDCPPMGSGRFPKEKIIN 150

Query: 196 SGFFWDVVTIDAQ-NKTRIYFGVKDTYVEAK-NCYSI 92
           SGF   +  ID++ N+  I       Y +   NCY +
Sbjct: 151 SGFMAKLTIIDSKYNEPAIKPEDMKPYKDTNTNCYDL 187


>ref|XP_002531705.1| conserved hypothetical protein [Ricinus communis]
           gi|223528648|gb|EEF30664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = -2

Query: 376 NWWLTIPDKSINIGYWPNTILPHLAEGANNVAWGGLAMAS---ANGDSPVMGFGIFPDGN 206
           NWW+   +  + +GYWP ++  +LA+ A  + WGG  + S       +  MG G FP+  
Sbjct: 282 NWWIQFGNNYV-LGYWPASLFSYLADSATMIEWGGEVVNSELDGQHTTTQMGSGHFPEEG 340

Query: 205 YMHSGFFWDVVTIDAQNKTRIYFGVKDTYVEAKNCYSIRTGEGEVVDSYLF 53
           +  SG+F ++  +D  NK R+     DT+ E  NCY+++ G      +Y F
Sbjct: 341 FGKSGYFKNIQIVDGSNKLRVPKDT-DTFTEQPNCYNVQIGNDGDWGNYFF 390


>gb|AFK34107.1| unknown [Medicago truncatula]
          Length = 426

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = -2

Query: 376 NWWLTIPDKSINIGYWPNTILPHLAEGANNVAWGGLAMASANG---DSPVMGFGIFPDGN 206
           NWW+   +  + +GYWP  +  +L E A+ + WGG  + S +     S  MG G FPD  
Sbjct: 307 NWWMQFGNDHV-LGYWPAPLFSYLTESASMIEWGGEVVNSESDGQHTSTQMGSGHFPDEG 365

Query: 205 YMHSGFFWDVVTIDAQNKTRIYFGVKD--TYVEAKNCYSIRTGEGEVVDSYLF 53
           +  + +F ++  +D  NK R     KD  TY E  NCY+++TG      +Y +
Sbjct: 366 FGKASYFENIQVVDGDNKLR---APKDLGTYTEKDNCYNVKTGNAGDWGTYFY 415


>ref|XP_003595856.1| hypothetical protein MTR_2g062610 [Medicago truncatula]
           gi|355484904|gb|AES66107.1| hypothetical protein
           MTR_2g062610 [Medicago truncatula]
          Length = 300

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = -2

Query: 376 NWWLTIPDKSINIGYWPNTILPHLAEGANNVAWGGLAMASANG---DSPVMGFGIFPDGN 206
           NWW+   +  + +GYWP  +  +L E A+ + WGG  + S +     S  MG G FPD  
Sbjct: 181 NWWMQFGNDHV-LGYWPAPLFSYLTESASMIEWGGEVVNSESDGQHTSTQMGSGHFPDEG 239

Query: 205 YMHSGFFWDVVTIDAQNKTRIYFGVKD--TYVEAKNCYSIRTGEGEVVDSYLF 53
           +  + +F ++  +D  NK R     KD  TY E  NCY+++TG      +Y +
Sbjct: 240 FGKASYFKNIQVVDGDNKLR---APKDLGTYTEKDNCYNVKTGNAGDWGTYFY 289


>ref|XP_003595855.1| hypothetical protein MTR_2g062610 [Medicago truncatula]
           gi|355484903|gb|AES66106.1| hypothetical protein
           MTR_2g062610 [Medicago truncatula]
          Length = 453

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = -2

Query: 376 NWWLTIPDKSINIGYWPNTILPHLAEGANNVAWGGLAMASANG---DSPVMGFGIFPDGN 206
           NWW+   +  + +GYWP  +  +L E A+ + WGG  + S +     S  MG G FPD  
Sbjct: 334 NWWMQFGNDHV-LGYWPAPLFSYLTESASMIEWGGEVVNSESDGQHTSTQMGSGHFPDEG 392

Query: 205 YMHSGFFWDVVTIDAQNKTRIYFGVKD--TYVEAKNCYSIRTGEGEVVDSYLF 53
           +  + +F ++  +D  NK R     KD  TY E  NCY+++TG      +Y +
Sbjct: 393 FGKASYFKNIQVVDGDNKLR---APKDLGTYTEKDNCYNVKTGNAGDWGTYFY 442


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