BLASTX nr result

ID: Coptis21_contig00033547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033547
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/...   163   2e-38
emb|CAN64851.1| hypothetical protein VITISV_024610 [Vitis vinifera]   161   7e-38
gb|ABK96044.1| unknown [Populus trichocarpa]                          154   1e-35
ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_003632922.1| PREDICTED: protein brittle-1, chloroplastic/...   145   7e-33

>ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 1
           [Vitis vinifera] gi|297735760|emb|CBI18447.3| unnamed
           protein product [Vitis vinifera]
          Length = 356

 Score =  163 bits (412), Expect = 2e-38
 Identities = 85/143 (59%), Positives = 101/143 (70%)
 Frame = +3

Query: 162 MVQKTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAADLKFQLPNVGKATKXXXXXXX 341
           M  ++ SQKK+Y V GDVYG            D S +    +FQLP++ +A +       
Sbjct: 1   MALESESQKKSYGVFGDVYGVMMVPKELEIEKDASID--QFRFQLPDLKQAFQDFMRTRE 58

Query: 342 XXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVN 521
                 GALAGAMTKAVL PLETIRTRMVVG+G +NI+GSF+EVIEQQGW GLWAGNT+N
Sbjct: 59  VGEFISGALAGAMTKAVLAPLETIRTRMVVGIGSKNISGSFLEVIEQQGWQGLWAGNTIN 118

Query: 522 MLRIIPTQAIELGTFECVKRAVT 590
           MLRIIPTQAIEL TFECVKR++T
Sbjct: 119 MLRIIPTQAIELATFECVKRSMT 141


>emb|CAN64851.1| hypothetical protein VITISV_024610 [Vitis vinifera]
          Length = 356

 Score =  161 bits (408), Expect = 7e-38
 Identities = 84/143 (58%), Positives = 100/143 (69%)
 Frame = +3

Query: 162 MVQKTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAADLKFQLPNVGKATKXXXXXXX 341
           M  ++ SQKK+Y V GDVYG            D S +    +FQ P++ +A +       
Sbjct: 1   MALESESQKKSYGVFGDVYGVMMVPKELEIEKDASID--QFRFQFPDLKQAFQDFMRTRE 58

Query: 342 XXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVN 521
                 GALAGAMTKAVL PLETIRTRMVVG+G +NI+GSF+EVIEQQGW GLWAGNT+N
Sbjct: 59  VGEFISGALAGAMTKAVLAPLETIRTRMVVGIGSKNISGSFLEVIEQQGWQGLWAGNTIN 118

Query: 522 MLRIIPTQAIELGTFECVKRAVT 590
           MLRIIPTQAIEL TFECVKR++T
Sbjct: 119 MLRIIPTQAIELATFECVKRSMT 141


>gb|ABK96044.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  154 bits (389), Expect = 1e-35
 Identities = 85/148 (57%), Positives = 98/148 (66%), Gaps = 7/148 (4%)
 Frame = +3

Query: 171 KTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAA-------DLKFQLPNVGKATKXXX 329
           +T SQKK   V+GDV G                 +        +L+FQLP++  A +   
Sbjct: 4   ETESQKKKCGVLGDVLGGVTMVLPKELDEPIPLPSPPTLAVPFELRFQLPDLKLAVRDFM 63

Query: 330 XXXXXXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAG 509
                     GALAGAMTKAVL PLETIRTRMVVGVG +NI+GSF+EVIEQQGW GLWAG
Sbjct: 64  RSREAGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAG 123

Query: 510 NTVNMLRIIPTQAIELGTFECVKRAVTS 593
           N +NMLRIIPTQAIELGTFECVKRA+TS
Sbjct: 124 NGINMLRIIPTQAIELGTFECVKRAMTS 151


>ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  150 bits (378), Expect = 2e-34
 Identities = 75/105 (71%), Positives = 85/105 (80%)
 Frame = +3

Query: 279 DLKFQLPNVGKATKXXXXXXXXXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAG 458
           +L+FQLP++  A +             GALAGAMTKAVL PLETIRTRMVVGVG +NI+G
Sbjct: 24  ELRFQLPDLKLAVRDFMRSREAGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISG 83

Query: 459 SFIEVIEQQGWTGLWAGNTVNMLRIIPTQAIELGTFECVKRAVTS 593
           SF+EVIEQQGW GLWAGN +NMLRIIPTQAIELGTFECVKRA+TS
Sbjct: 84  SFLEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTS 128


>ref|XP_003632922.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 2
           [Vitis vinifera]
          Length = 335

 Score =  145 bits (365), Expect = 7e-33
 Identities = 71/102 (69%), Positives = 83/102 (81%)
 Frame = +3

Query: 285 KFQLPNVGKATKXXXXXXXXXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSF 464
           +FQLP++ +A +             GALAGAMTKAVL PLETIRTRMVVG+G +NI+GSF
Sbjct: 19  RFQLPDLKQAFQDFMRTREVGEFISGALAGAMTKAVLAPLETIRTRMVVGIGSKNISGSF 78

Query: 465 IEVIEQQGWTGLWAGNTVNMLRIIPTQAIELGTFECVKRAVT 590
           +EVIEQQGW GLWAGNT+NMLRIIPTQAIEL TFECVKR++T
Sbjct: 79  LEVIEQQGWQGLWAGNTINMLRIIPTQAIELATFECVKRSMT 120


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