BLASTX nr result
ID: Coptis21_contig00033545
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033545 (226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263593.1| PREDICTED: nephrocystin-3 [Vitis vinifera] 53 3e-13 emb|CBI34541.3| unnamed protein product [Vitis vinifera] 53 3e-13 ref|XP_003530449.1| PREDICTED: nephrocystin-3-like [Glycine max] 53 3e-13 ref|XP_003525334.1| PREDICTED: nephrocystin-3-like [Glycine max] 53 3e-13 ref|XP_002518863.1| kinesin light chain, putative [Ricinus commu... 54 1e-12 >ref|XP_002263593.1| PREDICTED: nephrocystin-3 [Vitis vinifera] Length = 591 Score = 52.8 bits (125), Expect(2) = 3e-13 Identities = 23/30 (76%), Positives = 28/30 (93%) Frame = +3 Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224 +A VQL+K+DEAVELFEEAR IL++ECGPC Sbjct: 465 LACVQLFKIDEAVELFEEARGILEKECGPC 494 Score = 47.0 bits (110), Expect(2) = 3e-13 Identities = 25/38 (65%), Positives = 27/38 (71%) Frame = +2 Query: 38 WGGLQSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151 +G +SSFESAVAK R SGERK FFGVVL GL V Sbjct: 431 YGEARSSFESAVAKLRASGERKSPFFGVVLNQMGLACV 468 >emb|CBI34541.3| unnamed protein product [Vitis vinifera] Length = 423 Score = 52.8 bits (125), Expect(2) = 3e-13 Identities = 23/30 (76%), Positives = 28/30 (93%) Frame = +3 Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224 +A VQL+K+DEAVELFEEAR IL++ECGPC Sbjct: 297 LACVQLFKIDEAVELFEEARGILEKECGPC 326 Score = 47.0 bits (110), Expect(2) = 3e-13 Identities = 25/38 (65%), Positives = 27/38 (71%) Frame = +2 Query: 38 WGGLQSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151 +G +SSFESAVAK R SGERK FFGVVL GL V Sbjct: 263 YGEARSSFESAVAKLRASGERKSPFFGVVLNQMGLACV 300 >ref|XP_003530449.1| PREDICTED: nephrocystin-3-like [Glycine max] Length = 578 Score = 52.8 bits (125), Expect(3) = 3e-13 Identities = 23/30 (76%), Positives = 27/30 (90%) Frame = +3 Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224 +A VQL+K+DEA ELFEEAR IL+QECGPC Sbjct: 452 LACVQLFKIDEAAELFEEARGILEQECGPC 481 Score = 45.8 bits (107), Expect(3) = 3e-13 Identities = 24/34 (70%), Positives = 26/34 (76%) Frame = +2 Query: 50 QSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151 ++SFESAVAK R SGERK AFFGVVL GL V Sbjct: 422 RNSFESAVAKLRASGERKSAFFGVVLNQMGLACV 455 Score = 20.4 bits (41), Expect(3) = 3e-13 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +1 Query: 1 GVMLYMVAKLED 36 GVM YM+ + ED Sbjct: 409 GVMYYMIGRYED 420 >ref|XP_003525334.1| PREDICTED: nephrocystin-3-like [Glycine max] Length = 563 Score = 52.8 bits (125), Expect(3) = 3e-13 Identities = 23/30 (76%), Positives = 27/30 (90%) Frame = +3 Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224 +A VQL+K+DEA ELFEEAR IL+QECGPC Sbjct: 437 LACVQLFKIDEAAELFEEARGILEQECGPC 466 Score = 45.8 bits (107), Expect(3) = 3e-13 Identities = 24/34 (70%), Positives = 26/34 (76%) Frame = +2 Query: 50 QSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151 ++SFESAVAK R SGERK AFFGVVL GL V Sbjct: 407 RNSFESAVAKLRASGERKSAFFGVVLNQMGLACV 440 Score = 20.4 bits (41), Expect(3) = 3e-13 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +1 Query: 1 GVMLYMVAKLED 36 GVM YM+ + ED Sbjct: 394 GVMYYMIGRYED 405 >ref|XP_002518863.1| kinesin light chain, putative [Ricinus communis] gi|223541850|gb|EEF43396.1| kinesin light chain, putative [Ricinus communis] Length = 605 Score = 53.5 bits (127), Expect(2) = 1e-12 Identities = 23/30 (76%), Positives = 27/30 (90%) Frame = +3 Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224 +A VQL+K+DEA ELFEEAR IL+QECGPC Sbjct: 479 LACVQLFKIDEAAELFEEARAILEQECGPC 508 Score = 44.3 bits (103), Expect(2) = 1e-12 Identities = 23/34 (67%), Positives = 25/34 (73%) Frame = +2 Query: 50 QSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151 ++SFESAV K R SGERK AFFGVVL GL V Sbjct: 449 RNSFESAVTKLRASGERKSAFFGVVLNQMGLACV 482