BLASTX nr result

ID: Coptis21_contig00033545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033545
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263593.1| PREDICTED: nephrocystin-3 [Vitis vinifera]         53   3e-13
emb|CBI34541.3| unnamed protein product [Vitis vinifera]               53   3e-13
ref|XP_003530449.1| PREDICTED: nephrocystin-3-like [Glycine max]       53   3e-13
ref|XP_003525334.1| PREDICTED: nephrocystin-3-like [Glycine max]       53   3e-13
ref|XP_002518863.1| kinesin light chain, putative [Ricinus commu...    54   1e-12

>ref|XP_002263593.1| PREDICTED: nephrocystin-3 [Vitis vinifera]
          Length = 591

 Score = 52.8 bits (125), Expect(2) = 3e-13
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = +3

Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224
           +A VQL+K+DEAVELFEEAR IL++ECGPC
Sbjct: 465 LACVQLFKIDEAVELFEEARGILEKECGPC 494



 Score = 47.0 bits (110), Expect(2) = 3e-13
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = +2

Query: 38  WGGLQSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151
           +G  +SSFESAVAK R SGERK  FFGVVL   GL  V
Sbjct: 431 YGEARSSFESAVAKLRASGERKSPFFGVVLNQMGLACV 468


>emb|CBI34541.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 52.8 bits (125), Expect(2) = 3e-13
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = +3

Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224
           +A VQL+K+DEAVELFEEAR IL++ECGPC
Sbjct: 297 LACVQLFKIDEAVELFEEARGILEKECGPC 326



 Score = 47.0 bits (110), Expect(2) = 3e-13
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = +2

Query: 38  WGGLQSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151
           +G  +SSFESAVAK R SGERK  FFGVVL   GL  V
Sbjct: 263 YGEARSSFESAVAKLRASGERKSPFFGVVLNQMGLACV 300


>ref|XP_003530449.1| PREDICTED: nephrocystin-3-like [Glycine max]
          Length = 578

 Score = 52.8 bits (125), Expect(3) = 3e-13
 Identities = 23/30 (76%), Positives = 27/30 (90%)
 Frame = +3

Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224
           +A VQL+K+DEA ELFEEAR IL+QECGPC
Sbjct: 452 LACVQLFKIDEAAELFEEARGILEQECGPC 481



 Score = 45.8 bits (107), Expect(3) = 3e-13
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = +2

Query: 50  QSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151
           ++SFESAVAK R SGERK AFFGVVL   GL  V
Sbjct: 422 RNSFESAVAKLRASGERKSAFFGVVLNQMGLACV 455



 Score = 20.4 bits (41), Expect(3) = 3e-13
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 1   GVMLYMVAKLED 36
           GVM YM+ + ED
Sbjct: 409 GVMYYMIGRYED 420


>ref|XP_003525334.1| PREDICTED: nephrocystin-3-like [Glycine max]
          Length = 563

 Score = 52.8 bits (125), Expect(3) = 3e-13
 Identities = 23/30 (76%), Positives = 27/30 (90%)
 Frame = +3

Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224
           +A VQL+K+DEA ELFEEAR IL+QECGPC
Sbjct: 437 LACVQLFKIDEAAELFEEARGILEQECGPC 466



 Score = 45.8 bits (107), Expect(3) = 3e-13
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = +2

Query: 50  QSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151
           ++SFESAVAK R SGERK AFFGVVL   GL  V
Sbjct: 407 RNSFESAVAKLRASGERKSAFFGVVLNQMGLACV 440



 Score = 20.4 bits (41), Expect(3) = 3e-13
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 1   GVMLYMVAKLED 36
           GVM YM+ + ED
Sbjct: 394 GVMYYMIGRYED 405


>ref|XP_002518863.1| kinesin light chain, putative [Ricinus communis]
           gi|223541850|gb|EEF43396.1| kinesin light chain,
           putative [Ricinus communis]
          Length = 605

 Score = 53.5 bits (127), Expect(2) = 1e-12
 Identities = 23/30 (76%), Positives = 27/30 (90%)
 Frame = +3

Query: 135 MAWVQLYKVDEAVELFEEARTILKQECGPC 224
           +A VQL+K+DEA ELFEEAR IL+QECGPC
Sbjct: 479 LACVQLFKIDEAAELFEEARAILEQECGPC 508



 Score = 44.3 bits (103), Expect(2) = 1e-12
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = +2

Query: 50  QSSFESAVAKFRTSGERKLAFFGVVLIPNGLGTV 151
           ++SFESAV K R SGERK AFFGVVL   GL  V
Sbjct: 449 RNSFESAVTKLRASGERKSAFFGVVLNQMGLACV 482


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