BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033527
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
gb|ACU18704.1| unknown [Glycine max]                                   99   4e-19
ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ...    86   3e-15

>ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 367

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/91 (51%), Positives = 67/91 (73%)
 Frame = +2

Query: 5   LIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLEGGAILAAVQIFWSMGDLGLFPSP 184
           LIG+LC ++  E  +E+VRVRN RRP+TILVPN+G   GAI  AVQ+FW++   GL PS 
Sbjct: 71  LIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFWAVCSSGLLPSA 130

Query: 185 FIINQLISELCRLRKIDEAMEIFWVVEKKRL 277
           F++ +L+SELCRL    EA+ +  +VE+++L
Sbjct: 131 FVVVKLMSELCRLGNTVEAVRVLRIVEERKL 161


>gb|ACU18704.1| unknown [Glycine max]
          Length = 367

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/91 (51%), Positives = 67/91 (73%)
 Frame = +2

Query: 5   LIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLEGGAILAAVQIFWSMGDLGLFPSP 184
           LIG+LC ++  E  +E+VRVRN RRP+TILVPN+G   GAI  AVQ+FW++   GL PS 
Sbjct: 71  LIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFWAVCSSGLLPSA 130

Query: 185 FIINQLISELCRLRKIDEAMEIFWVVEKKRL 277
           F++ +L+SELCRL    EA+ +  +VE+++L
Sbjct: 131 FVVVKLMSELCRLGNTVEAVRVLRIVEERKL 161


>ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/90 (53%), Positives = 65/90 (72%)
 Frame = +2

Query: 5   LIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLEGGAILAAVQIFWSMGDLGLFPSP 184
           L+ +LC L+  E  +  VRV + R+P+TILVPNVG + GAI  AV +F ++ DLGL PS 
Sbjct: 186 LMRELCLLSAKEGAVNEVRVHSSRKPYTILVPNVGPKSGAIRPAVGVFLAVCDLGLLPST 245

Query: 185 FIINQLISELCRLRKIDEAMEIFWVVEKKR 274
           F+I QLI+ELCRL K+ EA EI  VVE+++
Sbjct: 246 FVIIQLITELCRLGKMTEAFEILKVVEERK 275


>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449484825|ref|XP_004156991.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 579

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/91 (52%), Positives = 61/91 (67%)
 Frame = +2

Query: 5   LIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLEGGAILAAVQIFWSMGDLGLFPSP 184
           LIG LC L+  E  +E+VRV +  RPFT+LVPNV  + GAI  AV IFW+   L L PS 
Sbjct: 281 LIGNLCSLSAKEGAVEKVRVNSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSS 340

Query: 185 FIINQLISELCRLRKIDEAMEIFWVVEKKRL 277
           F+  QLISELCRL ++ EA+ +  VVE  +L
Sbjct: 341 FVTVQLISELCRLGQMQEAIRVLKVVEGDKL 371


>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499354|gb|AES80557.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 578

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/91 (45%), Positives = 65/91 (71%)
 Frame = +2

Query: 5   LIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLEGGAILAAVQIFWSMGDLGLFPSP 184
           LIG LC ++  E  +E+V+V   RRP++ILVPN+G    AI  AV++F ++ + GL PS 
Sbjct: 282 LIGDLCLMSAKEGSVEKVKVTKTRRPYSILVPNMGGNRAAIQPAVEVFSAVVNSGLLPST 341

Query: 185 FIINQLISELCRLRKIDEAMEIFWVVEKKRL 277
           F++ +L+SELCRL   +EA+++  +VE+K+L
Sbjct: 342 FVVFRLMSELCRLGNTEEAVKVLRIVEEKKL 372