BLASTX nr result

ID: Coptis21_contig00033486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033486
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_003597899.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    71   8e-11
ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus c...    70   2e-10
ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    69   3e-10
ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    67   1e-09

>ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|222866654|gb|EEF03785.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
 Frame = +1

Query: 181 SFSFIPLKSVSSYLPNYAE---RQRKHVVGSKPPLCVNKCFSCNPCIPTLVT--HHPS-- 339
           S +F+P  S  S +P+      +Q+K V+GS+PP CVN+C +C PC+  LVT  HH +  
Sbjct: 22  SLTFLPPVSAVSSMPSRGSEDMKQKKMVLGSRPPQCVNRCSNCKPCMAALVTPPHHKNGV 81

Query: 340 QKKSSLNEDSNYYPVSWKCRCVKNISEP 423
           +  SS   D +YY +SWKC+C     +P
Sbjct: 82  RGPSSSKGDESYYLLSWKCKCGDKYFQP 109


>ref|XP_003597899.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355486947|gb|AES68150.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 112

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 9/70 (12%)
 Frame = +1

Query: 241 QRKHVVGSKPPLCVNKCFSCNPCIPTLVTH-HPSQKK--------SSLNEDSNYYPVSWK 393
           +RK  +GSKPP+CVNKC  C PC+ T+V + H  Q+K         S  ED +YY +SWK
Sbjct: 43  ERKVAIGSKPPVCVNKCMKCRPCMATVVVNDHDHQRKRKMKGFKLESSQEDDSYYLLSWK 102

Query: 394 CRCVKNISEP 423
           CRC   + +P
Sbjct: 103 CRCGNKLFQP 112


>ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus communis]
           gi|223536295|gb|EEF37947.1| hypothetical protein
           RCOM_0224470 [Ricinus communis]
          Length = 108

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +1

Query: 211 SSYLPNYAERQRKHVVGSKPPLCVNKCFSCNPCIPTLVTHHPSQKKSSLNE-DSNYYPVS 387
           S YL +   +Q K V+GS+PP C+N+C +C PC+  LVT  P   K+SL+  D +YY +S
Sbjct: 39  SPYLRDNDGKQMKMVLGSRPPQCINRCLNCRPCMAALVT--PPHHKTSLSRGDESYYLLS 96

Query: 388 WKCRCVKNISEP 423
           WKC+C     +P
Sbjct: 97  WKCKCGDKYFQP 108


>ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355505443|gb|AES86585.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 111

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
 Frame = +1

Query: 226 NYAERQRKHVVGSKPPLCVNKCFSCNPCIPTLVTHHPSQKKSSL------NEDSNYYPVS 387
           N + + RK V+GSKPP C+NKC +C PCI TLV    SQK+ S       +++  YY ++
Sbjct: 43  NDSLQDRKMVIGSKPPACLNKCMNCRPCIATLVV---SQKRKSYKVLSRGDDNDTYYLLA 99

Query: 388 WKCRCVKNISEP 423
           WKCRC   + +P
Sbjct: 100 WKCRCGNKVFQP 111


>ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355510400|gb|AES91542.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 92

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
 Frame = +1

Query: 241 QRKHVVGSKPPLCVNKCFSCNPCIPTLV--THHP----SQKKSSLNEDSNYYPVSWKCRC 402
           Q+K V+GS+PP CVNKC +C PC+ TLV   HH      + K +  +D  YY +SWKC+C
Sbjct: 26  QKKSVLGSRPPRCVNKCLNCRPCMATLVISPHHKVGQIHKAKITAEKDEGYYLMSWKCKC 85

Query: 403 VKNISEP 423
                +P
Sbjct: 86  GNKFFQP 92


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