BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033480
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   176   2e-42
ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   170   1e-40
emb|CBI24913.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   170   1e-40
ref|XP_002314040.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40

>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/133 (62%), Positives = 106/133 (79%)
 Frame = +3

Query: 3   AAYNNLWSVLGCIDSSVYGEPGVGLSRRQVLEQYQLYGDCVLGKSGSYKPNIRQMVKPLL 182
           AA+NN W+VLG +DS++YG P  GL+RRQVLEQYQ Y D +LG  G+ +PN+R +VKPLL
Sbjct: 238 AAFNNPWTVLGHVDSAIYGAPESGLTRRQVLEQYQAYADAILGTYGNNRPNVRDVVKPLL 297

Query: 183 GIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSVPSDIPSCGENAFGDV 362
           G+F+SEPGNGLWKR+ADAA + C T+KSF EETL AIPD+VLDS  ++ PS  ++ F +V
Sbjct: 298 GLFYSEPGNGLWKRRADAAFQSCTTIKSFFEETLVAIPDTVLDSPIAEAPSGRQDLFTNV 357

Query: 363 RGSLPLPYSFREQ 401
           RG LP PY+ REQ
Sbjct: 358 RGLLPPPYATREQ 370


>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
           vinifera]
          Length = 377

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/133 (63%), Positives = 102/133 (76%)
 Frame = +3

Query: 3   AAYNNLWSVLGCIDSSVYGEPGVGLSRRQVLEQYQLYGDCVLGKSGSYKPNIRQMVKPLL 182
           AAY+N W  LG +DS+VYG P   LSRRQVLEQYQ+YGD VL K G ++P+IR++VKPLL
Sbjct: 238 AAYHNPWYTLGHVDSAVYGAPVSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLL 297

Query: 183 GIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSVPSDIPSCGENAFGDV 362
             F+SEPGNGLWKRKADAA  HC+T+KSFLEETL AIPDSVLD+  +  PS  E+ F ++
Sbjct: 298 HFFYSEPGNGLWKRKADAAFFHCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANL 357

Query: 363 RGSLPLPYSFREQ 401
              LPLPY   EQ
Sbjct: 358 SDLLPLPYETSEQ 370


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/133 (63%), Positives = 102/133 (76%)
 Frame = +3

Query: 3   AAYNNLWSVLGCIDSSVYGEPGVGLSRRQVLEQYQLYGDCVLGKSGSYKPNIRQMVKPLL 182
           AAY+N W  LG +DS+VYG P   LSRRQVLEQYQ+YGD VL K G ++P+IR++VKPLL
Sbjct: 284 AAYHNPWYTLGHVDSAVYGAPVSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLL 343

Query: 183 GIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSVPSDIPSCGENAFGDV 362
             F+SEPGNGLWKRKADAA  HC+T+KSFLEETL AIPDSVLD+  +  PS  E+ F ++
Sbjct: 344 HFFYSEPGNGLWKRKADAAFFHCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANL 403

Query: 363 RGSLPLPYSFREQ 401
              LPLPY   EQ
Sbjct: 404 SDLLPLPYETSEQ 416


>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/133 (63%), Positives = 102/133 (76%)
 Frame = +3

Query: 3   AAYNNLWSVLGCIDSSVYGEPGVGLSRRQVLEQYQLYGDCVLGKSGSYKPNIRQMVKPLL 182
           AAY+N W  LG +DS+VYG P   LSRRQVLEQYQ+YGD VL K G ++P+IR++VKPLL
Sbjct: 294 AAYHNPWYTLGHVDSAVYGAPVSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLL 353

Query: 183 GIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSVPSDIPSCGENAFGDV 362
             F+SEPGNGLWKRKADAA  HC+T+KSFLEETL AIPDSVLD+  +  PS  E+ F ++
Sbjct: 354 HFFYSEPGNGLWKRKADAAFFHCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANL 413

Query: 363 RGSLPLPYSFREQ 401
              LPLPY   EQ
Sbjct: 414 SDLLPLPYETSEQ 426


>ref|XP_002314040.1| predicted protein [Populus trichocarpa] gi|222850448|gb|EEE87995.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  167 bits (424), Expect = 6e-40
 Identities = 81/135 (60%), Positives = 105/135 (77%), Gaps = 2/135 (1%)
 Frame = +3

Query: 3   AAYNNLWSVLGCIDSSVYGEPGVGLSRRQVLEQYQLYGDCVLGKSGSYKPNIRQMVKPLL 182
           AAYNNLW+ L  +DS+VYGEP  GL+RRQVLEQYQ+YGD VLG  G+ +PN+R++++PL 
Sbjct: 238 AAYNNLWNTLAHVDSAVYGEPSSGLTRRQVLEQYQVYGDAVLGTYGNNRPNMRELIRPLS 297

Query: 183 GIFHSEPGNGLWKRKADAAL--RHCETLKSFLEETLDAIPDSVLDSVPSDIPSCGENAFG 356
           G F+SEPGN LWKRKADAA   ++ +T+KSF EETL AIPD+VLDS  +++PS   + F 
Sbjct: 298 GFFYSEPGNSLWKRKADAAFLNKNIKTVKSFFEETLAAIPDAVLDSPVAELPSGRIDLFA 357

Query: 357 DVRGSLPLPYSFREQ 401
           +VRG LP PY  R +
Sbjct: 358 NVRGLLPPPYETRTE 372