BLASTX nr result

ID: Coptis21_contig00033470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033470
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19797.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_003549559.1| PREDICTED: protein LTV1 homolog [Glycine max]      83   3e-14
ref|XP_002306905.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_003524660.1| PREDICTED: protein LTV1 homolog [Glycine max]      73   2e-11
ref|XP_004146107.1| PREDICTED: protein LTV1 homolog [Cucumis sat...    72   6e-11

>emb|CBI19797.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/79 (51%), Positives = 54/79 (68%)
 Frame = -2

Query: 246 VEEKPRVRRLLDEQFDMLTLREYETESDSELNSFVVAEDESLVEKLNFSLKGHVKDELEL 67
           + E+PRV RLLDEQFD L   EY TESD +    V  + ESL +KLN +LK H  D+LEL
Sbjct: 239 ISEEPRVHRLLDEQFDQLERMEYGTESDDDYGGSVAEDYESLADKLNHALKDHATDDLEL 298

Query: 66  DAKYKVPTDIVCENEGSKN 10
           + KY+VP D++ + EG K+
Sbjct: 299 NEKYRVPADLLHDKEGLKD 317


>ref|XP_003549559.1| PREDICTED: protein LTV1 homolog [Glycine max]
          Length = 525

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
 Frame = -2

Query: 246 VEEKPRVRRLLDEQFDMLTLREYETESDSE----LNSFVVAEDESLVEKLNFSLKGHVKD 79
           V EKP  RRLLDEQFD+L  +EY T+ D +      ++   EDESL EKL  SLK HV D
Sbjct: 261 VGEKPGARRLLDEQFDLLEHQEYGTDDDDDGGDYYENYQADEDESLAEKLKHSLKNHVMD 320

Query: 78  ELELDAKYKVPTDIVCENE 22
           +LELD KYKVP+D++   E
Sbjct: 321 DLELDGKYKVPSDLLKNKE 339


>ref|XP_002306905.1| predicted protein [Populus trichocarpa] gi|222856354|gb|EEE93901.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = -2

Query: 264 KIYSKFVEEKPRVRRLLDEQFDMLTLREYETESDS-ELNSFVVAEDESLVEKLNFSLKGH 88
           ++   F +EK RVRR LDEQFD+L  +EY T+ +  E + ++  EDE L  KL  +L  H
Sbjct: 235 EVRGDFGDEKQRVRRPLDEQFDLLESQEYGTDGEGDEYDGYIAEEDEFLAGKLKHALNDH 294

Query: 87  VKDELELDAKYKVPTDIVCENEGSKNGE 4
             D+LELD KY+VP D++  N+  K+ E
Sbjct: 295 AVDDLELDEKYEVPADLLHGNDRPKDKE 322


>ref|XP_003524660.1| PREDICTED: protein LTV1 homolog [Glycine max]
          Length = 523

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
 Frame = -2

Query: 246 VEEKPRVRRLLDEQFDMLTLREYETESD--SELNSFVVAEDESLVEKLNFSLKGHVKDEL 73
           V EK R RRLLDEQFD+L  +EY T+ D      ++   EDESL EKL  SL  HV D+L
Sbjct: 260 VGEKQRARRLLDEQFDLLERQEYGTDDDDGDYYENYEADEDESLAEKLKHSLNNHVLDDL 319

Query: 72  EL-DAKYKVPTDIV 34
           EL D KYKVP D++
Sbjct: 320 ELDDDKYKVPADLL 333


>ref|XP_004146107.1| PREDICTED: protein LTV1 homolog [Cucumis sativus]
           gi|449512941|ref|XP_004164184.1| PREDICTED: protein LTV1
           homolog [Cucumis sativus]
          Length = 540

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
 Frame = -2

Query: 240 EKPRVRRLLDEQFDMLTLREYETESDSELNSF----VVAEDESLVEKLNFSLKGHVKDEL 73
           +KPR RRLLD+QFD L  R+Y + SDS+        +  E+ESL +KLN +L  H KD+L
Sbjct: 279 DKPRTRRLLDDQFDTLLNRDYAS-SDSDGTDCDEPCIAEEEESLAQKLNHALGNHSKDDL 337

Query: 72  ELDAKYKVPTDIVCENEGSKNGE 4
           EL+  YK P DI+   EG+++ E
Sbjct: 338 ELEQGYKAPADILSGKEGAEDKE 360


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