BLASTX nr result
ID: Coptis21_contig00033470
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033470 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19797.3| unnamed protein product [Vitis vinifera] 86 3e-15 ref|XP_003549559.1| PREDICTED: protein LTV1 homolog [Glycine max] 83 3e-14 ref|XP_002306905.1| predicted protein [Populus trichocarpa] gi|2... 76 2e-12 ref|XP_003524660.1| PREDICTED: protein LTV1 homolog [Glycine max] 73 2e-11 ref|XP_004146107.1| PREDICTED: protein LTV1 homolog [Cucumis sat... 72 6e-11 >emb|CBI19797.3| unnamed protein product [Vitis vinifera] Length = 500 Score = 85.9 bits (211), Expect = 3e-15 Identities = 41/79 (51%), Positives = 54/79 (68%) Frame = -2 Query: 246 VEEKPRVRRLLDEQFDMLTLREYETESDSELNSFVVAEDESLVEKLNFSLKGHVKDELEL 67 + E+PRV RLLDEQFD L EY TESD + V + ESL +KLN +LK H D+LEL Sbjct: 239 ISEEPRVHRLLDEQFDQLERMEYGTESDDDYGGSVAEDYESLADKLNHALKDHATDDLEL 298 Query: 66 DAKYKVPTDIVCENEGSKN 10 + KY+VP D++ + EG K+ Sbjct: 299 NEKYRVPADLLHDKEGLKD 317 >ref|XP_003549559.1| PREDICTED: protein LTV1 homolog [Glycine max] Length = 525 Score = 82.8 bits (203), Expect = 3e-14 Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 4/79 (5%) Frame = -2 Query: 246 VEEKPRVRRLLDEQFDMLTLREYETESDSE----LNSFVVAEDESLVEKLNFSLKGHVKD 79 V EKP RRLLDEQFD+L +EY T+ D + ++ EDESL EKL SLK HV D Sbjct: 261 VGEKPGARRLLDEQFDLLEHQEYGTDDDDDGGDYYENYQADEDESLAEKLKHSLKNHVMD 320 Query: 78 ELELDAKYKVPTDIVCENE 22 +LELD KYKVP+D++ E Sbjct: 321 DLELDGKYKVPSDLLKNKE 339 >ref|XP_002306905.1| predicted protein [Populus trichocarpa] gi|222856354|gb|EEE93901.1| predicted protein [Populus trichocarpa] Length = 502 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = -2 Query: 264 KIYSKFVEEKPRVRRLLDEQFDMLTLREYETESDS-ELNSFVVAEDESLVEKLNFSLKGH 88 ++ F +EK RVRR LDEQFD+L +EY T+ + E + ++ EDE L KL +L H Sbjct: 235 EVRGDFGDEKQRVRRPLDEQFDLLESQEYGTDGEGDEYDGYIAEEDEFLAGKLKHALNDH 294 Query: 87 VKDELELDAKYKVPTDIVCENEGSKNGE 4 D+LELD KY+VP D++ N+ K+ E Sbjct: 295 AVDDLELDEKYEVPADLLHGNDRPKDKE 322 >ref|XP_003524660.1| PREDICTED: protein LTV1 homolog [Glycine max] Length = 523 Score = 73.2 bits (178), Expect = 2e-11 Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 3/74 (4%) Frame = -2 Query: 246 VEEKPRVRRLLDEQFDMLTLREYETESD--SELNSFVVAEDESLVEKLNFSLKGHVKDEL 73 V EK R RRLLDEQFD+L +EY T+ D ++ EDESL EKL SL HV D+L Sbjct: 260 VGEKQRARRLLDEQFDLLERQEYGTDDDDGDYYENYEADEDESLAEKLKHSLNNHVLDDL 319 Query: 72 EL-DAKYKVPTDIV 34 EL D KYKVP D++ Sbjct: 320 ELDDDKYKVPADLL 333 >ref|XP_004146107.1| PREDICTED: protein LTV1 homolog [Cucumis sativus] gi|449512941|ref|XP_004164184.1| PREDICTED: protein LTV1 homolog [Cucumis sativus] Length = 540 Score = 71.6 bits (174), Expect = 6e-11 Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 4/83 (4%) Frame = -2 Query: 240 EKPRVRRLLDEQFDMLTLREYETESDSELNSF----VVAEDESLVEKLNFSLKGHVKDEL 73 +KPR RRLLD+QFD L R+Y + SDS+ + E+ESL +KLN +L H KD+L Sbjct: 279 DKPRTRRLLDDQFDTLLNRDYAS-SDSDGTDCDEPCIAEEEESLAQKLNHALGNHSKDDL 337 Query: 72 ELDAKYKVPTDIVCENEGSKNGE 4 EL+ YK P DI+ EG+++ E Sbjct: 338 ELEQGYKAPADILSGKEGAEDKE 360