BLASTX nr result

ID: Coptis21_contig00033468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033468
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870073.1| P-glycoprotein 9 [Arabidopsis lyrata subsp. ...    84   1e-14
emb|CBI30804.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002271185.1| PREDICTED: ABC transporter B family member 9...    83   2e-14
emb|CAN77320.1| hypothetical protein VITISV_009891 [Vitis vinifera]    83   2e-14
ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana] gi|3784...    83   3e-14

>ref|XP_002870073.1| P-glycoprotein 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297315909|gb|EFH46332.1| P-glycoprotein 9 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1239

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/59 (67%), Positives = 48/59 (81%)
 Frame = +3

Query: 24   SNKAKDSAATIFNILDSKPKIDSRNDENDTLANVRGDIDLHHVGFKYPTCLDVQIFQDV 200
            +NKAKDSAA+IF+ILDSKPKIDS +DE  TL NV GDI+  HV F+YP   DVQIF+D+
Sbjct: 959  TNKAKDSAASIFDILDSKPKIDSSSDEGTTLQNVHGDIEFRHVSFRYPMRPDVQIFRDL 1017


>emb|CBI30804.3| unnamed protein product [Vitis vinifera]
          Length = 1930

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/60 (66%), Positives = 48/60 (80%)
 Frame = +3

Query: 24   SNKAKDSAATIFNILDSKPKIDSRNDENDTLANVRGDIDLHHVGFKYPTCLDVQIFQDVS 203
            +NKAKDS ATIF +LDSKP IDS ++E  TLANV+GDI+  HV FKY T  DVQIF+D+S
Sbjct: 896  TNKAKDSTATIFQLLDSKPTIDSSSNEGTTLANVKGDIEFQHVSFKYSTRPDVQIFRDLS 955


>ref|XP_002271185.1| PREDICTED: ABC transporter B family member 9-like [Vitis vinifera]
          Length = 1270

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/60 (66%), Positives = 48/60 (80%)
 Frame = +3

Query: 24   SNKAKDSAATIFNILDSKPKIDSRNDENDTLANVRGDIDLHHVGFKYPTCLDVQIFQDVS 203
            +NKAKDS ATIF +LDSKP IDS ++E  TLANV+GDI+  HV FKY T  DVQIF+D+S
Sbjct: 989  TNKAKDSTATIFQLLDSKPTIDSSSNEGTTLANVKGDIEFQHVSFKYSTRPDVQIFRDLS 1048


>emb|CAN77320.1| hypothetical protein VITISV_009891 [Vitis vinifera]
          Length = 2006

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/60 (66%), Positives = 48/60 (80%)
 Frame = +3

Query: 24   SNKAKDSAATIFNILDSKPKIDSRNDENDTLANVRGDIDLHHVGFKYPTCLDVQIFQDVS 203
            +NKAKDS ATIF +LDSKP IDS ++E  TLANV+GDI+  HV FKY T  DVQIF+D+S
Sbjct: 982  TNKAKDSTATIFQLLDSKPTIDSSSNEGKTLANVKGDIEFQHVSFKYSTRPDVQIFRDLS 1041


>ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana]
            gi|378405145|sp|Q9M0M2.2|AB9B_ARATH RecName: Full=ABC
            transporter B family member 9; Short=ABC transporter
            ABCB.9; Short=AtABCB9; AltName: Full=Multidrug resistance
            protein 9; AltName: Full=P-glycoprotein 9
            gi|332658588|gb|AEE83988.1| P-glycoprotein 9 [Arabidopsis
            thaliana]
          Length = 1236

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/59 (67%), Positives = 47/59 (79%)
 Frame = +3

Query: 24   SNKAKDSAATIFNILDSKPKIDSRNDENDTLANVRGDIDLHHVGFKYPTCLDVQIFQDV 200
            SNKAKDSAA+IF+ILDS PKIDS +DE  TL NV GDI+  HV F+YP   DVQIF+D+
Sbjct: 956  SNKAKDSAASIFDILDSTPKIDSSSDEGTTLQNVNGDIEFRHVSFRYPMRPDVQIFRDL 1014


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