BLASTX nr result

ID: Coptis21_contig00033466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033466
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325552.1| white-brown-complex ABC transporter family [...   129   3e-28
ref|XP_002534493.1| ATP-binding cassette transporter, putative [...   128   4e-28
emb|CBI18157.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002268373.1| PREDICTED: ABC transporter G family member 2...   125   3e-27
ref|XP_002327338.1| white-brown-complex ABC transporter family [...   123   1e-26

>ref|XP_002325552.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222862427|gb|EEE99933.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 648

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 6/102 (5%)
 Frame = -1

Query: 289 LVASYNSLLAPKVKEACMVAANSTLR-----GKRSYKE-KNKRSITSTSWFNQFTILLQR 128
           L+ASYN+LLAPKVK ACM   + + +     G  S+KE ++   I+ +SWFNQF+ILLQR
Sbjct: 329 LIASYNTLLAPKVKAACMETGSISAKENGFIGSHSFKEHRSSDRISISSWFNQFSILLQR 388

Query: 127 SLKERRHESFNSLRVFQVIAAAFLAGIMWWHSDIRDVQDRLG 2
           SLKER+HESFN+LR+ QVI AA LAG+MWWHSD RD+QDRLG
Sbjct: 389 SLKERKHESFNTLRISQVIMAAVLAGLMWWHSDFRDIQDRLG 430


>ref|XP_002534493.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223525196|gb|EEF27890.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 572

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/102 (63%), Positives = 78/102 (76%), Gaps = 6/102 (5%)
 Frame = -1

Query: 289 LVASYNSLLAPKVKEACMV-----AANSTLRGKRSYKEKNKRSITS-TSWFNQFTILLQR 128
           L+ASYNS+LAP+V+ ACM      A  + L G  S KE    +I    +WFNQF+ILLQR
Sbjct: 251 LIASYNSMLAPRVRTACMETTLTPAKETILTGSHSSKENRCCNIAGFAAWFNQFSILLQR 310

Query: 127 SLKERRHESFNSLRVFQVIAAAFLAGIMWWHSDIRDVQDRLG 2
           SLKER+HE+FN+LRVFQVIAAA LAG+MWWHSD RD+QDRLG
Sbjct: 311 SLKERKHETFNALRVFQVIAAALLAGLMWWHSDFRDIQDRLG 352


>emb|CBI18157.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 5/101 (4%)
 Frame = -1

Query: 289 LVASYNSLLAPKVKEACMVAANSTLRGKR---SYKEKNKRSITS--TSWFNQFTILLQRS 125
           LV+SYNSLLAPKVK+AC +  N T   +    + KE  +R   S  ++WFNQF+ILLQR 
Sbjct: 346 LVSSYNSLLAPKVKDACNMDTNVTAPKETVSLASKECRRRCSYSGLSTWFNQFSILLQRG 405

Query: 124 LKERRHESFNSLRVFQVIAAAFLAGIMWWHSDIRDVQDRLG 2
           LKER+HESFNSLRVFQVIAAA LAG+MWWHSD  D+QDRLG
Sbjct: 406 LKERKHESFNSLRVFQVIAAALLAGLMWWHSDFLDIQDRLG 446


>ref|XP_002268373.1| PREDICTED: ABC transporter G family member 25-like [Vitis vinifera]
          Length = 664

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 5/101 (4%)
 Frame = -1

Query: 289 LVASYNSLLAPKVKEACMVAANSTLRGKR---SYKEKNKRSITS--TSWFNQFTILLQRS 125
           LV+SYNSLLAPKVK+AC +  N T   +    + KE  +R   S  ++WFNQF+ILLQR 
Sbjct: 346 LVSSYNSLLAPKVKDACNMDTNVTAPKETVSLASKECRRRCSYSGLSTWFNQFSILLQRG 405

Query: 124 LKERRHESFNSLRVFQVIAAAFLAGIMWWHSDIRDVQDRLG 2
           LKER+HESFNSLRVFQVIAAA LAG+MWWHSD  D+QDRLG
Sbjct: 406 LKERKHESFNSLRVFQVIAAALLAGLMWWHSDFLDIQDRLG 446


>ref|XP_002327338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222835708|gb|EEE74143.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 652

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/96 (61%), Positives = 73/96 (76%)
 Frame = -1

Query: 289 LVASYNSLLAPKVKEACMVAANSTLRGKRSYKEKNKRSITSTSWFNQFTILLQRSLKERR 110
           L+ASYN+LLAPK + A M    + +    S + ++   I+  +WFNQF+ILLQRSLKER+
Sbjct: 339 LIASYNTLLAPKARAAFMETKENGIGSYNSKEHRSSDRISIDAWFNQFSILLQRSLKERK 398

Query: 109 HESFNSLRVFQVIAAAFLAGIMWWHSDIRDVQDRLG 2
           HESFN+LRVFQVI AA  AG+MWWHSD RDVQDRLG
Sbjct: 399 HESFNTLRVFQVIMAAVFAGLMWWHSDFRDVQDRLG 434


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