BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033464
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99771.1| retrotransposon protein, putative, unclassified [...    99   2e-24
emb|CAH67380.1| OSIGBa0159F11.4 [Oryza sativa Indica Group] gi|1...   100   3e-24
emb|CAH66757.1| OSIGBa0158F05.6 [Oryza sativa Indica Group]           100   3e-24
gb|ABA93961.1| retrotransposon protein, putative, unclassified, ...   100   4e-24
gb|AAO66539.1| retrotransposon protein, putative, unclassified [...    99   6e-24

>gb|ABA99771.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1770

 Score = 99.4 bits (246), Expect(2) = 2e-24
 Identities = 45/90 (50%), Positives = 62/90 (68%)
 Frame = -1

Query: 335  ARLKGARIIREAEFTDWLSNVVAVPKKNGKVRMCVNFTDVNLKCLKDSYPMPRVDELVDI 156
            ARL  A  IRE    +WL+N V VPK NGK+RMC+++TD+N  C KD YP+PR+D++VD 
Sbjct: 798  ARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDS 857

Query: 155  MAGFKIFSFIDTSIGYNQVTICRPYQEKTI 66
             AG  +  F+D   GY+Q+ + R  +EKTI
Sbjct: 858  TAGCDLLCFLDAYSGYHQIRMAREDEEKTI 887



 Score = 38.1 bits (87), Expect(2) = 2e-24
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -2

Query: 64  IFMVEGGTYCYTRMPFGLKNA 2
           IF+   GTYCYT MPFGLKNA
Sbjct: 887 IFITPIGTYCYTTMPFGLKNA 907


>emb|CAH67380.1| OSIGBa0159F11.4 [Oryza sativa Indica Group]
            gi|116634846|emb|CAH67296.1| OSIGBa0103O01.14 [Oryza
            sativa Indica Group]
          Length = 1965

 Score =  100 bits (248), Expect(2) = 3e-24
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = -1

Query: 335  ARLKGARIIREAEFTDWLSNVVAVPKKNGKVRMCVNFTDVNLKCLKDSYPMPRVDELVDI 156
            ARL  A  IRE   T+WL+N V VPK NGK+RMC+++TD+N  C KD YP+PR+D++VD 
Sbjct: 784  ARLLEAGFIREVIHTEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDS 843

Query: 155  MAGFKIFSFIDTSIGYNQVTICRPYQEKT 69
             AG  +  F+D   GY+Q+ + R  +EKT
Sbjct: 844  TAGCDLLCFLDAYSGYHQIRMAREDEEKT 872



 Score = 36.6 bits (83), Expect(2) = 3e-24
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -2

Query: 61  FMVEGGTYCYTRMPFGLKNA 2
           F+   GTYCYT MPFGLKNA
Sbjct: 874 FITPIGTYCYTTMPFGLKNA 893


>emb|CAH66757.1| OSIGBa0158F05.6 [Oryza sativa Indica Group]
          Length = 973

 Score = 99.8 bits (247), Expect(2) = 3e-24
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = -1

Query: 335 ARLKGARIIREAEFTDWLSNVVAVPKKNGKVRMCVNFTDVNLKCLKDSYPMPRVDELVDI 156
           ARL  A  IRE    +WL+N V VPK NGK+RMC+++TD+N  C KDSYP+PR+D++VD 
Sbjct: 673 ARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDSYPLPRIDQIVDS 732

Query: 155 MAGFKIFSFIDTSIGYNQVTICRPYQEKT 69
            AG  +  F+D   GY+Q+ + R  +EKT
Sbjct: 733 TAGCDLLCFLDAYSGYHQIRMAREDEEKT 761



 Score = 37.0 bits (84), Expect(2) = 3e-24
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -2

Query: 61  FMVEGGTYCYTRMPFGLKNA 2
           F+   GTYCYT MPFGLKNA
Sbjct: 763 FITPVGTYCYTSMPFGLKNA 782


>gb|ABA93961.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1986

 Score = 99.8 bits (247), Expect(2) = 4e-24
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = -1

Query: 335  ARLKGARIIREAEFTDWLSNVVAVPKKNGKVRMCVNFTDVNLKCLKDSYPMPRVDELVDI 156
            ARL  A  IRE    +WL+N V VPK NGK+RMC+++TD+N  C KD YP+PR+D++VD 
Sbjct: 848  ARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDS 907

Query: 155  MAGFKIFSFIDTSIGYNQVTICRPYQEKT 69
             AG  +  F+DT  GY+Q+ + R  +EKT
Sbjct: 908  TAGCDLLCFLDTYSGYHQIRMAREDEEKT 936



 Score = 36.6 bits (83), Expect(2) = 4e-24
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -2

Query: 61  FMVEGGTYCYTRMPFGLKNA 2
           F+   GTYCYT MPFGLKNA
Sbjct: 938 FITPIGTYCYTTMPFGLKNA 957


>gb|AAO66539.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|108712176|gb|ABF99971.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 2027

 Score = 98.6 bits (244), Expect(2) = 6e-24
 Identities = 44/89 (49%), Positives = 61/89 (68%)
 Frame = -1

Query: 335  ARLKGARIIREAEFTDWLSNVVAVPKKNGKVRMCVNFTDVNLKCLKDSYPMPRVDELVDI 156
            ARL  A  IRE    +WL+N V VPK NGK+RMC+++TD+N  C KD YP+PR+D++VD 
Sbjct: 848  ARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDS 907

Query: 155  MAGFKIFSFIDTSIGYNQVTICRPYQEKT 69
             AG  +  F+D   GY+Q+ + R  +EKT
Sbjct: 908  TAGCDLLCFLDAYSGYHQIRVAREDEEKT 936



 Score = 37.0 bits (84), Expect(2) = 6e-24
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -2

Query: 61  FMVEGGTYCYTRMPFGLKNA 2
           F+   GTYCYT MPFGLKNA
Sbjct: 938 FITPVGTYCYTSMPFGLKNA 957