BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033453
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]   142   2e-32
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ...   138   4e-31
ref|NP_190540.1| pentatricopeptide repeat-containing protein [Ar...   137   7e-31

>ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 358

 Score =  143 bits (360), Expect = 2e-32
 Identities = 64/72 (88%), Positives = 70/72 (97%)
 Frame = +2

Query: 5   LGHHSEKLAVAFGLMNSQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHC 184
           LGHHSEKLAVAFGL++++DGEPILVVKNLRICGDCHNAIKFISAI GREITVRD+ RFHC
Sbjct: 287 LGHHSEKLAVAFGLISTKDGEPILVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHC 346

Query: 185 FKEGRCSCGDYW 220
           FKEG+CSCGDYW
Sbjct: 347 FKEGQCSCGDYW 358


>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  142 bits (359), Expect = 2e-32
 Identities = 63/72 (87%), Positives = 70/72 (97%)
 Frame = +2

Query: 5   LGHHSEKLAVAFGLMNSQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHC 184
           LGHHSEKLAVAFGL++++DGEP+LVVKNLRICGDCHNAIKFISAI GREITVRD+ RFHC
Sbjct: 648 LGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHC 707

Query: 185 FKEGRCSCGDYW 220
           FKEG+CSCGDYW
Sbjct: 708 FKEGQCSCGDYW 719


>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  142 bits (359), Expect = 2e-32
 Identities = 63/72 (87%), Positives = 70/72 (97%)
 Frame = +2

Query: 5   LGHHSEKLAVAFGLMNSQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHC 184
           LGHHSEKLAVAFGL++++DGEP+LVVKNLRICGDCHNAIKFISAI GREITVRD+ RFHC
Sbjct: 648 LGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHC 707

Query: 185 FKEGRCSCGDYW 220
           FKEG+CSCGDYW
Sbjct: 708 FKEGQCSCGDYW 719


>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321830|gb|EFH52251.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 721

 Score =  138 bits (348), Expect = 4e-31
 Identities = 60/72 (83%), Positives = 69/72 (95%)
 Frame = +2

Query: 5   LGHHSEKLAVAFGLMNSQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHC 184
           LGHHSEKLAVAFGLM+++DGE I+VVKNLRICGDCHNAIKF+SA+ GREI VRD+LRFHC
Sbjct: 650 LGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHC 709

Query: 185 FKEGRCSCGDYW 220
           FK+G+CSCGDYW
Sbjct: 710 FKDGKCSCGDYW 721


>ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49710 gi|6723416|emb|CAB66909.1| putative protein
           [Arabidopsis thaliana] gi|332645058|gb|AEE78579.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 721

 Score =  137 bits (346), Expect = 7e-31
 Identities = 59/72 (81%), Positives = 69/72 (95%)
 Frame = +2

Query: 5   LGHHSEKLAVAFGLMNSQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHC 184
           LGHHSEKLAVAFGLM+++DGE ++VVKNLRICGDCHNAIKF+SA+ GREI VRD+LRFHC
Sbjct: 650 LGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHC 709

Query: 185 FKEGRCSCGDYW 220
           FK+G+CSCGDYW
Sbjct: 710 FKDGKCSCGDYW 721