BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033452
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29860.3| unnamed protein product [Vitis vinifera]              223   1e-56
ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-56
dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                          222   2e-56
ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indi...   203   1e-50

>emb|CBI29860.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  223 bits (569), Expect = 1e-56
 Identities = 105/139 (75%), Positives = 123/139 (88%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPVKD 240
           +I+ACA SGALD GKWVHA+I+K +I+ DLEL+TAL+NMYA+CGCIER+K++FD MPVKD
Sbjct: 268 VISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKD 327

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGRSYWS 60
           TKAWSSMIVGLAI+GLAEDAL+ F  M++  V+PN VTFIGVLSACAH GLVSEGR YWS
Sbjct: 328 TKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWS 387

Query: 59  SMIEFGIEPLMEHYGCMVD 3
           SM+EFGI P ME YGCMVD
Sbjct: 388 SMLEFGIVPSMELYGCMVD 406



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/116 (40%), Positives = 71/116 (61%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPVKD 240
           ++ AC+   AL+ G+ VHA + K        + TAL+N YA+C  I  + K+FDE+  ++
Sbjct: 167 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 226

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGR 72
             AWS+MI G A  GL  +AL +F +MQK  V P++VT + V+SACA  G +  G+
Sbjct: 227 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGK 282


>ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  223 bits (569), Expect = 1e-56
 Identities = 105/139 (75%), Positives = 123/139 (88%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPVKD 240
           +I+ACA SGALD GKWVHA+I+K +I+ DLEL+TAL+NMYA+CGCIER+K++FD MPVKD
Sbjct: 199 VISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKD 258

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGRSYWS 60
           TKAWSSMIVGLAI+GLAEDAL+ F  M++  V+PN VTFIGVLSACAH GLVSEGR YWS
Sbjct: 259 TKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWS 318

Query: 59  SMIEFGIEPLMEHYGCMVD 3
           SM+EFGI P ME YGCMVD
Sbjct: 319 SMLEFGIVPSMELYGCMVD 337



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/116 (40%), Positives = 71/116 (61%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPVKD 240
           ++ AC+   AL+ G+ VHA + K        + TAL+N YA+C  I  + K+FDE+  ++
Sbjct: 98  VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 157

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGR 72
             AWS+MI G A  GL  +AL +F +MQK  V P++VT + V+SACA  G +  G+
Sbjct: 158 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGK 213


>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score =  222 bits (566), Expect = 2e-56
 Identities = 101/139 (72%), Positives = 123/139 (88%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPVKD 240
           +++ACA  GALD+GKWVHA+I K +I VDLEL TALINMYA+CGCIE+++++FDEM VKD
Sbjct: 199 VLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKD 258

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGRSYWS 60
           +KAWSSMIVGLAIHGLAEDAL+VF+ M++   +PN VTFIG+LSACAH GLVS+G+ YWS
Sbjct: 259 SKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWS 318

Query: 59  SMIEFGIEPLMEHYGCMVD 3
           SM+E GIEP MEHYGCMVD
Sbjct: 319 SMLELGIEPSMEHYGCMVD 337



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/116 (35%), Positives = 71/116 (61%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPVKD 240
           ++ AC+   AL+ GK +HA I +        + ++L+N Y++C  I  ++K+FDE+  ++
Sbjct: 98  VLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERN 157

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGR 72
              WS+M+ G A  G+  +AL +F EMQ   + P++V+ +GVLSACA  G +  G+
Sbjct: 158 LVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGK 213


>ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Brachypodium distachyon]
          Length = 600

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/139 (69%), Positives = 116/139 (83%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPVKD 240
           +I+ACA +GALDLGKWVHAFID+  I VDLEL+TALI+MYA+CG IER+K +FD M  +D
Sbjct: 235 VISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERD 294

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGRSYWS 60
           TKAWS+MIVGLA+HGLAEDAL +F+ M +  VRPN VTF+GVLSACAH GLV +GR YW 
Sbjct: 295 TKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWC 354

Query: 59  SMIEFGIEPLMEHYGCMVD 3
           +M E GIE  ME+YGCMVD
Sbjct: 355 TMQELGIEASMENYGCMVD 373



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPV-K 243
           ++ AC    AL  G+ +HA    H ++    + T L+N+YARC  +  ++ +FD M   K
Sbjct: 136 VLKACT---ALGEGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVEDK 192

Query: 242 DTKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGRSYW 63
           +  AWSSMI G +  G+  +AL +F +MQ   V P++VT + V+SACA  G +  G+   
Sbjct: 193 NLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVH 252

Query: 62  SSMIEFGIEPLMEHYGCMVD 3
           + +   GI   +E    ++D
Sbjct: 253 AFIDRKGITVDLELSTALID 272


>gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
          Length = 565

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/139 (70%), Positives = 117/139 (84%)
 Frame = -3

Query: 419 LITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPVKD 240
           +I+ACA +GALDLG+WVHAFID+  I VDLEL+TALI+MYA+CG IER+K +FD M  +D
Sbjct: 236 VISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERD 295

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGRSYWS 60
           TKAWS+MIVGLAIHGL E AL +F+ M +  VRPN VTFIGVLSACAH GLV+EGR YWS
Sbjct: 296 TKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWS 355

Query: 59  SMIEFGIEPLMEHYGCMVD 3
           +M E GI+P ME+YGCMVD
Sbjct: 356 TMQELGIKPSMENYGCMVD 374



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 ITACATSGALDLGKWVHAFIDKHVIKVDLELTTALINMYARCGCIERSKKLFDEMPV-KD 240
           + AC+   AL  G+ +H+   +  ++    + T L+N+YA+C  +  ++ +FD M   K+
Sbjct: 135 LKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKN 194

Query: 239 TKAWSSMIVGLAIHGLAEDALDVFAEMQKDNVRPNQVTFIGVLSACAHRGLVSEGRSYWS 60
             AWS+MI G +  G+  +AL +F EMQ  +V P++VT + V+SACA  G +  GR   +
Sbjct: 195 LAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHA 254

Query: 59  SMIEFGIEPLMEHYGCMVD 3
            +   GI   +E    ++D
Sbjct: 255 FIDRKGITVDLELSTALID 273