BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033423
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534290.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_004158334.1| PREDICTED: uncharacterized protein LOC101224...   115   5e-24
ref|XP_004141131.1| PREDICTED: uncharacterized protein LOC101203...   115   5e-24
ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arab...   113   2e-23
ref|NP_566005.1| transcription termination factor domain-contain...   112   2e-23

>ref|XP_002534290.1| conserved hypothetical protein [Ricinus communis]
           gi|223525568|gb|EEF28093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 372

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/93 (63%), Positives = 72/93 (77%), Gaps = 6/93 (6%)
 Frame = -2

Query: 262 SISKTIDSSQNPQFTNAFFNVKVR------NFASDSSKFPEYEMPTVTWGVVQGRKEKLV 101
           S+S  I + QNP      F+   R      +F++ SSKFPEYEMP+VTWGVVQG++EKLV
Sbjct: 29  SLSSVIKTQQNPCARIPRFDDPFRVSQLGASFSTSSSKFPEYEMPSVTWGVVQGKREKLV 88

Query: 100 SRVIICDYLKNLGIVPDELEHLELPSTVEIMKE 2
           +RVIICDYL NLGI+PDELE+LELPSTVE+MKE
Sbjct: 89  NRVIICDYLNNLGIIPDELENLELPSTVEVMKE 121


>ref|XP_004158334.1| PREDICTED: uncharacterized protein LOC101224846 [Cucumis sativus]
          Length = 516

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/62 (85%), Positives = 59/62 (95%)
 Frame = -2

Query: 187 FASDSSKFPEYEMPTVTWGVVQGRKEKLVSRVIICDYLKNLGIVPDELEHLELPSTVEIM 8
           +++ SSK PEYEMPTVTWG VQGRKEKLVSRVIICDYLK+LGIVPDELEHLELPSTVE+M
Sbjct: 63  YSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVM 122

Query: 7   KE 2
           +E
Sbjct: 123 RE 124


>ref|XP_004141131.1| PREDICTED: uncharacterized protein LOC101203314 [Cucumis sativus]
          Length = 516

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/62 (85%), Positives = 59/62 (95%)
 Frame = -2

Query: 187 FASDSSKFPEYEMPTVTWGVVQGRKEKLVSRVIICDYLKNLGIVPDELEHLELPSTVEIM 8
           +++ SSK PEYEMPTVTWG VQGRKEKLVSRVIICDYLK+LGIVPDELEHLELPSTVE+M
Sbjct: 63  YSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVM 122

Query: 7   KE 2
           +E
Sbjct: 123 RE 124


>ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp.
           lyrata] gi|297327784|gb|EFH58204.1| hypothetical protein
           ARALYDRAFT_903808 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/112 (51%), Positives = 81/112 (72%), Gaps = 4/112 (3%)
 Frame = -2

Query: 325 IAFRKNCSIQYLLKKLLIPNVSISKT---IDSSQN-PQFTNAFFNVKVRNFASDSSKFPE 158
           +  R+N  +  + ++ LI  ++ ++T   I+   N PQF N     ++ ++A+ SSKFPE
Sbjct: 4   LLLRRNKFLALIRRQSLIFPITSTETKTLINPDPNIPQFQNPCSIFRIAHYATQSSKFPE 63

Query: 157 YEMPTVTWGVVQGRKEKLVSRVIICDYLKNLGIVPDELEHLELPSTVEIMKE 2
           YEMPTVTWGV+QG+KEKLV+RV ICDYLK LGI+ DELE +ELPST+E+M E
Sbjct: 64  YEMPTVTWGVIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCE 115


>ref|NP_566005.1| transcription termination factor domain-containing protein
           [Arabidopsis thaliana] gi|3212859|gb|AAC23410.1|
           expressed protein [Arabidopsis thaliana]
           gi|14532592|gb|AAK64024.1| unknown protein [Arabidopsis
           thaliana] gi|19310761|gb|AAL85111.1| unknown protein
           [Arabidopsis thaliana] gi|330255268|gb|AEC10362.1|
           transcription termination factor domain-containing
           protein [Arabidopsis thaliana]
          Length = 507

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/114 (51%), Positives = 80/114 (70%), Gaps = 4/114 (3%)
 Frame = -2

Query: 331 MRIAFRKNCSIQYLLKKLLIPNVSISKT---IDSSQN-PQFTNAFFNVKVRNFASDSSKF 164
           M    R+N  +  L ++ LI  ++ ++    I+   N PQF N     ++ ++A+ SSKF
Sbjct: 1   MSYLLRRNKFVALLKRQSLIFPITSTEAKTLINPDPNIPQFQNPCSIFRIAHYATQSSKF 60

Query: 163 PEYEMPTVTWGVVQGRKEKLVSRVIICDYLKNLGIVPDELEHLELPSTVEIMKE 2
           PEYEMPTVTWGV+QG+KEKLV+RV ICDYLK LGI+ DELE +ELPST+E+M E
Sbjct: 61  PEYEMPTVTWGVIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCE 114