BLASTX nr result

ID: Coptis21_contig00033416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033416
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870124.1| transcription factor [Arabidopsis lyrata sub...   160   1e-37
dbj|BAD44550.1| unknown protein [Arabidopsis thaliana]                157   1e-36
dbj|BAD43635.1| unknown protein [Arabidopsis thaliana]                157   1e-36
ref|NP_193438.2| ureidoglycine aminohydrolase [Arabidopsis thali...   157   1e-36
dbj|BAJ33761.1| unnamed protein product [Thellungiella halophila]     155   2e-36

>ref|XP_002870124.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
           gi|297315960|gb|EFH46383.1| transcription factor
           [Arabidopsis lyrata subsp. lyrata]
          Length = 298

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/120 (63%), Positives = 92/120 (76%)
 Frame = +3

Query: 45  SQLLVFFTLFSVVKWVVGETGFCSENGYESNVIETESIYHKVINPTLSPIHLQDLPGFTR 224
           S+ L+FF + S+VK    + GFCS      +  +T+ IY K  NPTLSP HLQDLPGFTR
Sbjct: 3   SRHLIFFIVISLVKASKSDDGFCSAPSIAESDEKTKPIYWKATNPTLSPSHLQDLPGFTR 62

Query: 225 SVYREDHAVITPESHVFSPLPDWSNTMGAYLITPAMGSHFVMYLAKMQVLSRSALPSEDV 404
           SVY+ DHA+ITPESHV+SPLPDW NT+GAYLITPA GSHFVMYLAKM+ +S S LP +D+
Sbjct: 63  SVYKRDHALITPESHVYSPLPDWKNTLGAYLITPATGSHFVMYLAKMKEMSSSGLPPQDI 122


>dbj|BAD44550.1| unknown protein [Arabidopsis thaliana]
          Length = 298

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/120 (62%), Positives = 90/120 (75%)
 Frame = +3

Query: 45  SQLLVFFTLFSVVKWVVGETGFCSENGYESNVIETESIYHKVINPTLSPIHLQDLPGFTR 224
           S  L+ F + S+VK    + GFCS      +  +T  IY K  NPTLSP HLQDLPGFTR
Sbjct: 3   SLYLIVFIVISLVKASKSDDGFCSAPSIVESDEKTNPIYWKATNPTLSPSHLQDLPGFTR 62

Query: 225 SVYREDHAVITPESHVFSPLPDWSNTMGAYLITPAMGSHFVMYLAKMQVLSRSALPSEDV 404
           SVY+ DHA+ITPESHV+SPLPDW+NT+GAYLITPA GSHFVMYLAKM+ +S S LP +D+
Sbjct: 63  SVYKRDHALITPESHVYSPLPDWTNTLGAYLITPATGSHFVMYLAKMKEMSSSGLPPQDI 122


>dbj|BAD43635.1| unknown protein [Arabidopsis thaliana]
          Length = 298

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/120 (62%), Positives = 90/120 (75%)
 Frame = +3

Query: 45  SQLLVFFTLFSVVKWVVGETGFCSENGYESNVIETESIYHKVINPTLSPIHLQDLPGFTR 224
           S  L+ F + S+VK    + GFCS      +  +T  IY K  NPTLSP HLQDLPGFTR
Sbjct: 3   SLYLIVFIVISLVKASKSDDGFCSAPSIVESDEKTNPIYWKATNPTLSPSHLQDLPGFTR 62

Query: 225 SVYREDHAVITPESHVFSPLPDWSNTMGAYLITPAMGSHFVMYLAKMQVLSRSALPSEDV 404
           SVY+ DHA+ITPESHV+SPLPDW+NT+GAYLITPA GSHFVMYLAKM+ +S S LP +D+
Sbjct: 63  SVYKRDHALITPESHVYSPLPDWTNTLGAYLITPATGSHFVMYLAKMKEMSSSGLPPQDI 122


>ref|NP_193438.2| ureidoglycine aminohydrolase [Arabidopsis thaliana]
           gi|26451095|dbj|BAC42652.1| unknown protein [Arabidopsis
           thaliana] gi|296248910|gb|ADH04164.1| ureidoglycine
           aminohydrolase [Arabidopsis thaliana]
           gi|332658443|gb|AEE83843.1| ureidoglycine aminohydrolase
           [Arabidopsis thaliana]
          Length = 298

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/120 (62%), Positives = 90/120 (75%)
 Frame = +3

Query: 45  SQLLVFFTLFSVVKWVVGETGFCSENGYESNVIETESIYHKVINPTLSPIHLQDLPGFTR 224
           S  L+ F + S+VK    + GFCS      +  +T  IY K  NPTLSP HLQDLPGFTR
Sbjct: 3   SLYLIVFIVISLVKASKSDDGFCSAPSIVESDEKTNPIYWKATNPTLSPSHLQDLPGFTR 62

Query: 225 SVYREDHAVITPESHVFSPLPDWSNTMGAYLITPAMGSHFVMYLAKMQVLSRSALPSEDV 404
           SVY+ DHA+ITPESHV+SPLPDW+NT+GAYLITPA GSHFVMYLAKM+ +S S LP +D+
Sbjct: 63  SVYKRDHALITPESHVYSPLPDWTNTLGAYLITPATGSHFVMYLAKMKEMSSSGLPPQDI 122


>dbj|BAJ33761.1| unnamed protein product [Thellungiella halophila]
          Length = 298

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/117 (63%), Positives = 89/117 (76%)
 Frame = +3

Query: 54  LVFFTLFSVVKWVVGETGFCSENGYESNVIETESIYHKVINPTLSPIHLQDLPGFTRSVY 233
           L  F + S+VK    + GFCS      +   ++ IY KV NPTLSP HLQDLPGFTRSVY
Sbjct: 6   LFIFIIISLVKASESDDGFCSAPSIAESDEVSKLIYGKVTNPTLSPSHLQDLPGFTRSVY 65

Query: 234 REDHAVITPESHVFSPLPDWSNTMGAYLITPAMGSHFVMYLAKMQVLSRSALPSEDV 404
           + DHA+ITPESHV+SPLPDW+NT+GAYLITPAMGSHFVMY AKM+ +S S LP +D+
Sbjct: 66  KRDHALITPESHVYSPLPDWTNTLGAYLITPAMGSHFVMYFAKMKEMSSSGLPPQDI 122


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