BLASTX nr result

ID: Coptis21_contig00033409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033409
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arab...   119   3e-25
emb|CBI31915.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...   117   7e-25
gb|ABD65133.1| hypothetical protein 40.t00008 [Brassica oleracea]     116   2e-24
ref|NP_001190749.1| uncharacterized protein [Arabidopsis thalian...   115   3e-24

>ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arabidopsis lyrata subsp.
           lyrata] gi|297315950|gb|EFH46373.1| hypothetical protein
           ARALYDRAFT_493150 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/112 (49%), Positives = 76/112 (67%)
 Frame = +3

Query: 3   SSVCLLFMLDDIITAARHKKGWIPCRLFSLNSVTLTLLSICAKLPVDLTTPMPSAKDQLS 182
           S +C + M  D++   RH+K W PC+ FSLN+ TLT +S+C KL +DL TPMPS +DQL+
Sbjct: 29  SVICGVAMFSDLLHGLRHRKFWFPCKFFSLNATTLTFISVCVKLSLDLNTPMPSRQDQLA 88

Query: 183 KLTGTTFICISMCFLNPSIGDNRESECLTNMAALSILVITIMVNICMQISTG 338
           KL+ + F+C  M    PS+G     + L N+ AL ILVIT +VNIC+Q+ TG
Sbjct: 89  KLSSSVFVCTVMANSMPSLGFMVTQDLLMNLVALGILVITDVVNICIQLGTG 140


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/113 (51%), Positives = 74/113 (65%)
 Frame = +3

Query: 3   SSVCLLFMLDDIITAARHKKGWIPCRLFSLNSVTLTLLSICAKLPVDLTTPMPSAKDQLS 182
           S VC L M  D   A RHKK W PC+ FSLN+ +LT++++  KL VDL T MP  +DQLS
Sbjct: 32  SLVCSLAMGADAFLALRHKKFWFPCKFFSLNATSLTIIAVATKLSVDLNTSMPRCQDQLS 91

Query: 183 KLTGTTFICISMCFLNPSIGDNRESECLTNMAALSILVITIMVNICMQISTGV 341
           KL+ T  +C  M    PSIG     E  +N+ AL ILVIT+MVN+C+Q+ TGV
Sbjct: 92  KLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGV 144


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/113 (51%), Positives = 74/113 (65%)
 Frame = +3

Query: 3   SSVCLLFMLDDIITAARHKKGWIPCRLFSLNSVTLTLLSICAKLPVDLTTPMPSAKDQLS 182
           S VC L M  D   A RHKK W PC+ FSLN+ +LT++++  KL VDL T MP  +DQLS
Sbjct: 32  SLVCSLAMGADAFLALRHKKFWFPCKFFSLNATSLTIIAVATKLSVDLNTSMPRCQDQLS 91

Query: 183 KLTGTTFICISMCFLNPSIGDNRESECLTNMAALSILVITIMVNICMQISTGV 341
           KL+ T  +C  M    PSIG     E  +N+ AL ILVIT+MVN+C+Q+ TGV
Sbjct: 92  KLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGV 144


>gb|ABD65133.1| hypothetical protein 40.t00008 [Brassica oleracea]
          Length = 742

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/112 (48%), Positives = 75/112 (66%)
 Frame = +3

Query: 3   SSVCLLFMLDDIITAARHKKGWIPCRLFSLNSVTLTLLSICAKLPVDLTTPMPSAKDQLS 182
           S +C   M  D++ A RH+K W PC+ FSLN+ TLT +S+C KL +DL TPMPS +DQL+
Sbjct: 29  SLICGAAMFADLLHAFRHRKYWFPCKYFSLNATTLTFISVCVKLSLDLNTPMPSRQDQLA 88

Query: 183 KLTGTTFICISMCFLNPSIGDNRESECLTNMAALSILVITIMVNICMQISTG 338
           KL+ + F C+ M    PS+G     + L N+ AL ILV+T + NIC+Q+ TG
Sbjct: 89  KLSSSVFFCVVMANSMPSLGFMVTRDLLMNLVALGILVVTDVANICIQLGTG 140


>ref|NP_001190749.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332658470|gb|AEE83870.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 647

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/112 (48%), Positives = 75/112 (66%)
 Frame = +3

Query: 3   SSVCLLFMLDDIITAARHKKGWIPCRLFSLNSVTLTLLSICAKLPVDLTTPMPSAKDQLS 182
           S +C + M  D++   RH+K W PC+ FSLN+ TLT +S+C KL +DL T MPS +DQL+
Sbjct: 29  SLICGVAMFSDLLHGFRHRKFWFPCKFFSLNATTLTFISVCVKLSLDLNTSMPSRQDQLA 88

Query: 183 KLTGTTFICISMCFLNPSIGDNRESECLTNMAALSILVITIMVNICMQISTG 338
           KL+ + F+C  M    PS+G     + L N+ AL ILVIT +VNIC+Q+ TG
Sbjct: 89  KLSSSVFVCTVMANSMPSLGYMVTQDLLMNLTALGILVITDVVNICIQLGTG 140


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