BLASTX nr result

ID: Coptis21_contig00033397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033397
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634863.1| PREDICTED: omega-6 fatty acid desaturase, ch...   159   3e-37
gb|ACZ06070.1| chloroplast omega-6 fatty acid desaturase [Arachi...   156   2e-36
gb|ACU18536.1| unknown [Glycine max]                                  154   1e-35
gb|AFK34579.1| unknown [Medicago truncatula]                          152   3e-35
ref|XP_003610331.1| Chloroplast omega-6 fatty acid desaturase [M...   152   3e-35

>ref|XP_003634863.1| PREDICTED: omega-6 fatty acid desaturase, chloroplastic-like [Vitis
           vinifera] gi|296090576|emb|CBI40939.3| unnamed protein
           product [Vitis vinifera]
          Length = 441

 Score =  159 bits (401), Expect = 3e-37
 Identities = 70/82 (85%), Positives = 76/82 (92%)
 Frame = +1

Query: 1   VHIPHHISPRIPSYNLRAAHQSLQENWGKYLNEASWNWRLMKTIVTNCHVYNEDQNYIAF 180
           VHIPHHISPRIPSYNLRAAHQSLQENWGKYLNEA WNWRLMKTI+T CHVYN++QNY+AF
Sbjct: 360 VHIPHHISPRIPSYNLRAAHQSLQENWGKYLNEARWNWRLMKTILTMCHVYNKEQNYVAF 419

Query: 181 DEIAPEESLPITILRKVMPDFA 246
           D +APEES PI  LRKVMPD+A
Sbjct: 420 DNLAPEESQPIVFLRKVMPDYA 441


>gb|ACZ06070.1| chloroplast omega-6 fatty acid desaturase [Arachis hypogaea]
          Length = 442

 Score =  156 bits (394), Expect = 2e-36
 Identities = 68/82 (82%), Positives = 78/82 (95%)
 Frame = +1

Query: 1   VHIPHHISPRIPSYNLRAAHQSLQENWGKYLNEASWNWRLMKTIVTNCHVYNEDQNYIAF 180
           VHIPHHISPRIPSYNLRAAH+SLQENWGKYLNEASWNWRLMKTI+T CHVY++ QNY+AF
Sbjct: 361 VHIPHHISPRIPSYNLRAAHKSLQENWGKYLNEASWNWRLMKTIMTVCHVYDKQQNYVAF 420

Query: 181 DEIAPEESLPITILRKVMPDFA 246
           DE+APE+S PIT L++VMPD+A
Sbjct: 421 DELAPEDSRPITFLKEVMPDYA 442


>gb|ACU18536.1| unknown [Glycine max]
          Length = 248

 Score =  154 bits (388), Expect = 1e-35
 Identities = 66/82 (80%), Positives = 78/82 (95%)
 Frame = +1

Query: 1   VHIPHHISPRIPSYNLRAAHQSLQENWGKYLNEASWNWRLMKTIVTNCHVYNEDQNYIAF 180
           VHIPHHISPRIPSYNLRAAH+SLQENWG+YLNEASWNWRLMKTI+T CHVY+++QNY+AF
Sbjct: 167 VHIPHHISPRIPSYNLRAAHKSLQENWGQYLNEASWNWRLMKTIMTVCHVYDKEQNYVAF 226

Query: 181 DEIAPEESLPITILRKVMPDFA 246
           DE+APE+S PIT L++ MPD+A
Sbjct: 227 DELAPEDSRPITFLKETMPDYA 248


>gb|AFK34579.1| unknown [Medicago truncatula]
          Length = 446

 Score =  152 bits (384), Expect = 3e-35
 Identities = 65/82 (79%), Positives = 77/82 (93%)
 Frame = +1

Query: 1   VHIPHHISPRIPSYNLRAAHQSLQENWGKYLNEASWNWRLMKTIVTNCHVYNEDQNYIAF 180
           VHIPHHISP+IPSYNLRAAH+S+QENWGKYLNEASWNWRLMKTI+T CHVY++ QNY++F
Sbjct: 365 VHIPHHISPKIPSYNLRAAHKSIQENWGKYLNEASWNWRLMKTIMTVCHVYDKQQNYVSF 424

Query: 181 DEIAPEESLPITILRKVMPDFA 246
           DE+AP+ES PI  L+KVMPD+A
Sbjct: 425 DEVAPKESRPIRFLKKVMPDYA 446


>ref|XP_003610331.1| Chloroplast omega-6 fatty acid desaturase [Medicago truncatula]
           gi|355511386|gb|AES92528.1| Chloroplast omega-6 fatty
           acid desaturase [Medicago truncatula]
          Length = 446

 Score =  152 bits (384), Expect = 3e-35
 Identities = 65/82 (79%), Positives = 77/82 (93%)
 Frame = +1

Query: 1   VHIPHHISPRIPSYNLRAAHQSLQENWGKYLNEASWNWRLMKTIVTNCHVYNEDQNYIAF 180
           VHIPHHISP+IPSYNLRAAH+S+QENWGKYLNEASWNWRLMKTI+T CHVY++ QNY++F
Sbjct: 365 VHIPHHISPKIPSYNLRAAHKSIQENWGKYLNEASWNWRLMKTIMTVCHVYDKQQNYVSF 424

Query: 181 DEIAPEESLPITILRKVMPDFA 246
           DE+AP+ES PI  L+KVMPD+A
Sbjct: 425 DEVAPKESRPIRFLKKVMPDYA 446


Top