BLASTX nr result

ID: Coptis21_contig00033395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033395
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316491.1| cationic amino acid transporter [Populus tri...   173   1e-41
ref|XP_002515785.1| cationic amino acid transporter, putative [R...   170   1e-40
ref|XP_002310991.1| cationic amino acid transporter [Populus tri...   169   3e-40
emb|CBI25025.3| unnamed protein product [Vitis vinifera]              168   4e-40
ref|XP_002269556.1| PREDICTED: high affinity cationic amino acid...   168   4e-40

>ref|XP_002316491.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222865531|gb|EEF02662.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 600

 Score =  173 bits (438), Expect = 1e-41
 Identities = 74/99 (74%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   FYMVANAVIYRRYVCVGTTSPWPTLSFLFSFSLTAIIFTLLWQFCPAGKPKAFMLGACSV 181
           FYMVANAV+YRRYV +GTT+PWPTL+FL SFSLT+I+FTL+W F P GK KAFMLGAC+V
Sbjct: 438 FYMVANAVVYRRYVAIGTTNPWPTLAFLCSFSLTSILFTLIWHFMPQGKGKAFMLGACAV 497

Query: 182 VAVALLQIFHLLVPQAQKPEYWGVPLMPWIPSISIFLNV 298
           +A+A++Q+FH LVPQA+KPE+WGVPLMPWIP +SIFLN+
Sbjct: 498 IAIAIIQLFHCLVPQARKPEFWGVPLMPWIPCVSIFLNI 536


>ref|XP_002515785.1| cationic amino acid transporter, putative [Ricinus communis]
           gi|223545113|gb|EEF46624.1| cationic amino acid
           transporter, putative [Ricinus communis]
          Length = 576

 Score =  170 bits (430), Expect = 1e-40
 Identities = 72/99 (72%), Positives = 89/99 (89%)
 Frame = +2

Query: 2   FYMVANAVIYRRYVCVGTTSPWPTLSFLFSFSLTAIIFTLLWQFCPAGKPKAFMLGACSV 181
           FYMVANAVIYRRYV +GTT PWPTLSFL SFS T+++FTL+W F P GKPKAFMLGAC++
Sbjct: 414 FYMVANAVIYRRYVAIGTTKPWPTLSFLCSFSFTSLLFTLIWHFMPQGKPKAFMLGACTM 473

Query: 182 VAVALLQIFHLLVPQAQKPEYWGVPLMPWIPSISIFLNV 298
            A+A++Q+F+ +VPQA+KPE+WGVPLMPWIP +SIFLN+
Sbjct: 474 TAIAIIQVFNCMVPQARKPEFWGVPLMPWIPCVSIFLNI 512


>ref|XP_002310991.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222850811|gb|EEE88358.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 196

 Score =  169 bits (427), Expect = 3e-40
 Identities = 72/99 (72%), Positives = 89/99 (89%)
 Frame = +2

Query: 2   FYMVANAVIYRRYVCVGTTSPWPTLSFLFSFSLTAIIFTLLWQFCPAGKPKAFMLGACSV 181
           FYMVANA++YRRYV +GTT+PWPTLSFL SFS T+I+FTL+W F P GK KAFMLGAC+V
Sbjct: 33  FYMVANALVYRRYVAIGTTNPWPTLSFLCSFSFTSILFTLIWHFMPNGKGKAFMLGACAV 92

Query: 182 VAVALLQIFHLLVPQAQKPEYWGVPLMPWIPSISIFLNV 298
           +A+A++Q+FH +VPQA+KPE+WGVPLMPWIP  SIFLN+
Sbjct: 93  IAIAIIQLFHCIVPQARKPEFWGVPLMPWIPCASIFLNI 131


>emb|CBI25025.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/99 (77%), Positives = 87/99 (87%)
 Frame = +2

Query: 2   FYMVANAVIYRRYVCVGTTSPWPTLSFLFSFSLTAIIFTLLWQFCPAGKPKAFMLGACSV 181
           FYMVANAVIYRRYV VG T+PWPTLSFL SFSLT+IIFTL+W F   G PK  MLGAC+V
Sbjct: 375 FYMVANAVIYRRYVSVGATNPWPTLSFLVSFSLTSIIFTLIWHFAAPGHPKEVMLGACTV 434

Query: 182 VAVALLQIFHLLVPQAQKPEYWGVPLMPWIPSISIFLNV 298
           VAVA+LQ+FH +VPQ +KPE+WGVPLMPWIPSISIFLN+
Sbjct: 435 VAVAILQMFHCMVPQVRKPEHWGVPLMPWIPSISIFLNI 473


>ref|XP_002269556.1| PREDICTED: high affinity cationic amino acid transporter 1 [Vitis
           vinifera]
          Length = 586

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/99 (77%), Positives = 87/99 (87%)
 Frame = +2

Query: 2   FYMVANAVIYRRYVCVGTTSPWPTLSFLFSFSLTAIIFTLLWQFCPAGKPKAFMLGACSV 181
           FYMVANAVIYRRYV VG T+PWPTLSFL SFSLT+IIFTL+W F   G PK  MLGAC+V
Sbjct: 425 FYMVANAVIYRRYVSVGATNPWPTLSFLVSFSLTSIIFTLIWHFAAPGHPKEVMLGACTV 484

Query: 182 VAVALLQIFHLLVPQAQKPEYWGVPLMPWIPSISIFLNV 298
           VAVA+LQ+FH +VPQ +KPE+WGVPLMPWIPSISIFLN+
Sbjct: 485 VAVAILQMFHCMVPQVRKPEHWGVPLMPWIPSISIFLNI 523


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