BLASTX nr result

ID: Coptis21_contig00033386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033386
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274265.1| PREDICTED: uncharacterized protein LOC100250...    62   6e-08
ref|XP_002325914.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07
ref|XP_002520830.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_002274265.1| PREDICTED: uncharacterized protein LOC100250135 [Vitis vinifera]
           gi|297736524|emb|CBI25395.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = +2

Query: 5   QACTPERL-KSPADFDD--VNFDGSKTKTVYSRRQGLTKVENKGKAVAATPLSCPPPKRT 175
           +A TP R  KS ++     V+ D  +  TVY+RR    K + K KAVA  PLSCPP +R 
Sbjct: 91  KASTPVRASKSSSNLSSGKVDDDVFEPLTVYNRRNTAAKRKGKEKAVAE-PLSCPPLERM 149

Query: 176 KTLWDDSEKEQGGVCLSKTCIVRNPKGKKRRSSMPEVSQDFINQQNAYFAEIDDF 340
           +    +   + G   +SK+     P  KK+R    ++SQDFI +Q AYFAE+D F
Sbjct: 150 R----NELNKDGDTRVSKSYTA--PNRKKQRVPKNDLSQDFIEEQKAYFAEVDAF 198


>ref|XP_002325914.1| predicted protein [Populus trichocarpa] gi|222862789|gb|EEF00296.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
 Frame = +2

Query: 80  TVYSRRQGLTKVENKGKAVA-ATPLSCPPPKRTKTLWDDSEKEQGGVCL-SKTCIVRNPK 253
           +VY+RRQ  T   NK K  A A P+S  P   T+  WD  +  +GGV   SK+C   + K
Sbjct: 94  SVYTRRQSATDKRNKSKGKAIAVPISFAPAPNTEFAWD--KMNEGGVTHPSKSCTFHHKK 151

Query: 254 GKKRRSSMPE-----VSQDFINQQNAYFAEIDDF 340
            + R+ S  +     + QDFI QQ AYFAEID F
Sbjct: 152 KQCRKLSDEDEKKHALPQDFIEQQRAYFAEIDAF 185


>ref|XP_002520830.1| conserved hypothetical protein [Ricinus communis]
           gi|223539961|gb|EEF41539.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 219

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
 Frame = +2

Query: 80  TVYSRRQGLTKVENKGKAVAATPLSCPPPKRTKTLWDDSEKEQGGVCLSKTCIVRNPKGK 259
           +VYSRRQ   K + K KA+A  P+SC P  +T+    +   E+    LSK+C++  P  K
Sbjct: 116 SVYSRRQSADKRKGKRKAIAE-PMSCFPALKTQFTGSEMN-EREVTSLSKSCVL--PYEK 171

Query: 260 KRRSSMPE-------VSQDFINQQNAYFAEIDDF 340
           K+R  +P+       + QDFI +Q AYFAEID F
Sbjct: 172 KQRQRIPKEDDAKYALPQDFIERQRAYFAEIDAF 205


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