BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033375
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             84   9e-15
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   76   3e-12
gb|EEC73664.1| hypothetical protein OsI_08202 [Oryza sativa Indi...    74   9e-12
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    74   1e-11
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    72   4e-11

>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/94 (40%), Positives = 63/94 (67%)
 Frame = +3

Query: 15  SHLLFADDIMIFSKGNMRSLRCIDDLLHRYAMISGQFMNKGKCKLFLGSIPICRKESIEE 194
           +HL+FADD++IFSK + +S++ + + L+ +   SG  +N GKC++FLG +    K+ +  
Sbjct: 63  THLIFADDLVIFSKASRQSMQAVQNCLNWFGRNSGLEVNTGKCEMFLGGLTDSEKQELSS 122

Query: 195 VLGIRVGYLPEKYLGVPLIQGRVTKAAVAPLLDR 296
            +GI +G  P KYLG+P+   R+TKA   PLL++
Sbjct: 123 CMGITLGNFPMKYLGLPVNTHRLTKADYEPLLEK 156


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/97 (42%), Positives = 58/97 (59%)
 Frame = +3

Query: 6   PGPSHLLFADDIMIFSKGNMRSLRCIDDLLHRYAMISGQFMNKGKCKLFLGSIPICRKES 185
           P  +HL FADDIMIF+ G  RSL  + + L  ++  SG ++N  K ++FL  +      +
Sbjct: 143 PVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNTEKTEIFLRGLNGTEAST 202

Query: 186 IEEVLGIRVGYLPEKYLGVPLIQGRVTKAAVAPLLDR 296
           +  V+G   GYLP +YLGV L   R+TK+   PLLDR
Sbjct: 203 LCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDR 239


>gb|EEC73664.1| hypothetical protein OsI_08202 [Oryza sativa Indica Group]
          Length = 725

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = +3

Query: 6   PGPSHLLFADDIMIFSKGNMRSLRCIDDLLHRYAMISGQFMNKGKCKLFLGSI-PICRKE 182
           PG SHLLFADD ++F K N    R I  +L  YA  +GQ +N  KC +  G + P   K+
Sbjct: 323 PGISHLLFADDTLLFFKANRLQARVIHGILGDYAAATGQLINPAKCSIMFGDVSPTEIKD 382

Query: 183 SIEEVLGIRVGYLPEKYLGVPLIQGRVTKAAVAPLLDR 296
            I  +L I      ++YLG P  +GR+ K    PL D+
Sbjct: 383 DIRNILQIGSNAFEDRYLGFPTPEGRMNKGKFQPLHDK 420


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/95 (40%), Positives = 50/95 (52%)
 Frame = +3

Query: 12  PSHLLFADDIMIFSKGNMRSLRCIDDLLHRYAMISGQFMNKGKCKLFLGSIPICRKESIE 191
           P H  + DD+M+F K  M SL  +  L  RYA  SGQ MN  K  +F G I   R  +I 
Sbjct: 423 PFHCFYVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKSFIFAGGITDTRMNNIV 482

Query: 192 EVLGIRVGYLPEKYLGVPLIQGRVTKAAVAPLLDR 296
            +LG  VG LP  YLG P+ +G+       P+ D+
Sbjct: 483 NILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADK 517


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = +3

Query: 6   PGPSHLLFADDIMIFSKGNMRSLRCIDDLLHRYAMISGQFMNKGKCK-LFLGSIPICRKE 182
           PG SHLLFADD ++F K +      I D+L  Y   +GQ +N  KC  LF    P   +E
Sbjct: 539 PGISHLLFADDSLLFFKADTEQASRIRDVLQMYESSTGQLINPSKCSMLFSDFCPQQHQE 598

Query: 183 SIEEVLGIRVGYLPEKYLGVPLIQGRVTKAAVAPLLDR 296
            I+ +LG+      EKYLG+P  +GR+      P+ DR
Sbjct: 599 DIKRILGVTNSSFEEKYLGLPTPEGRMKAGQFQPIKDR 636