BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033372
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22283.3| unnamed protein product [Vitis vinifera]              223   4e-56
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi...   223   4e-56
ref|XP_002526074.1| pentatricopeptide repeat-containing protein,...   194   1e-47
ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2...   192   6e-47
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi...   187   2e-45

>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  223 bits (567), Expect = 4e-56
 Identities = 116/195 (59%), Positives = 146/195 (74%), Gaps = 3/195 (1%)
 Frame = +1

Query: 178 YEQKLPPRGNAVNEEGIGFEVNG-AEPISDYVSLVCEVETNLHFLEERDEEILSQRILGL 354
           +EQK PP GN+   +   FE  G AEP++    +  E E  LHFLEER+E+ILS+RIL L
Sbjct: 132 FEQKFPPLGNSEIHKNPDFEHIGVAEPLTISTGISSEFEDKLHFLEERNEQILSKRILML 191

Query: 355 SRSNKVRSSLELYKSMEASGLQPNAHSCNSLLACLLRNGFLNDALKIFEAMK-KEVTSGH 531
           SRSNKVRS LELY++ME SGLQP++H+CNSLL+CLLRN  L+DAL++FE+MK  E T+GH
Sbjct: 192 SRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESMKANESTTGH 251

Query: 532 TYSLILKAVASTQGYDSALKLFIKLEGE-GAENVFDAITYNTMLSICSKENNWLQAERVW 708
           +YSL+LKA+A+ QGYDSALK+F KLE E   +  FD I Y TM+SIC K NNW Q ER+W
Sbjct: 252 SYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERIW 311

Query: 709 KKFKENGHKTTTLTY 753
           +  KENG   T +TY
Sbjct: 312 RSMKENGLVGTIVTY 326


>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Vitis vinifera]
          Length = 546

 Score =  223 bits (567), Expect = 4e-56
 Identities = 116/195 (59%), Positives = 146/195 (74%), Gaps = 3/195 (1%)
 Frame = +1

Query: 178 YEQKLPPRGNAVNEEGIGFEVNG-AEPISDYVSLVCEVETNLHFLEERDEEILSQRILGL 354
           +EQK PP GN+   +   FE  G AEP++    +  E E  LHFLEER+E+ILS+RIL L
Sbjct: 52  FEQKFPPLGNSEIHKNPDFEHIGVAEPLTISTGISSEFEDKLHFLEERNEQILSKRILML 111

Query: 355 SRSNKVRSSLELYKSMEASGLQPNAHSCNSLLACLLRNGFLNDALKIFEAMK-KEVTSGH 531
           SRSNKVRS LELY++ME SGLQP++H+CNSLL+CLLRN  L+DAL++FE+MK  E T+GH
Sbjct: 112 SRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESMKANESTTGH 171

Query: 532 TYSLILKAVASTQGYDSALKLFIKLEGE-GAENVFDAITYNTMLSICSKENNWLQAERVW 708
           +YSL+LKA+A+ QGYDSALK+F KLE E   +  FD I Y TM+SIC K NNW Q ER+W
Sbjct: 172 SYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERIW 231

Query: 709 KKFKENGHKTTTLTY 753
           +  KENG   T +TY
Sbjct: 232 RSMKENGLVGTIVTY 246


>ref|XP_002526074.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534571|gb|EEF36268.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 285

 Score =  194 bits (494), Expect = 1e-47
 Identities = 102/207 (49%), Positives = 142/207 (68%), Gaps = 2/207 (0%)
 Frame = +1

Query: 139 IILERKGKAVGLSYEQKLPPRGNAVNEEGIGFEVNG-AEPISDYVSLVCEVETNLHFLEE 315
           +I  RK +    S+E+ LPP GN    +    +  G  +P     + +   E+ +H LEE
Sbjct: 28  VIQSRKDELDMDSFEKYLPPWGNLTVHQEPELDPAGIVQPSISPRNTISLDESRVHLLEE 87

Query: 316 RDEEILSQRILGLSRSNKVRSSLELYKSMEASGLQPNAHSCNSLLACLLRNGFLNDALKI 495
            +EE LS+RIL LSRSNKVRS+LEL++SME SGL+PN+H+CNS ++CLLRN  L+ AL++
Sbjct: 88  GNEEELSRRILMLSRSNKVRSALELFRSMEFSGLRPNSHACNSFISCLLRNKLLDHALRV 147

Query: 496 FEAMKK-EVTSGHTYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICS 672
           F+ MK+ E+++GHT++LILKAVA  QG +S+L +F KL     +N FD I YNTMLSIC 
Sbjct: 148 FKFMKRNEISTGHTHTLILKAVADIQGCESSLYMFAKLGLSSEQNDFDVIVYNTMLSICG 207

Query: 673 KENNWLQAERVWKKFKENGHKTTTLTY 753
           + NNW+  ER+W+  KEN H  T +TY
Sbjct: 208 RVNNWVDMERIWRSMKENSHTGTEITY 234


>ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  192 bits (488), Expect = 6e-47
 Identities = 95/157 (60%), Positives = 121/157 (77%), Gaps = 2/157 (1%)
 Frame = +1

Query: 289 ETNLHFLEERDEEILSQRILGLSRSNKVRSSLELYKSMEASGLQPNAHSCNSLLACLLRN 468
           E+ +HFLEE DE  LS+RIL LSRSNK+RS+L+L +SME SGLQPN H+CNSLL+CL+R+
Sbjct: 36  ESRVHFLEETDENELSRRILMLSRSNKIRSALQLLRSMEFSGLQPNTHACNSLLSCLIRH 95

Query: 469 GFLNDALKIFEAMKK-EVTSGHTYSLILKAVASTQGYDSALKLFIKLEGEGAENV-FDAI 642
               DAL++FE MKK E+T+GH YSLILKAVAST+G DSAL +F +LE    E   FD I
Sbjct: 96  ELHEDALRVFEYMKKNEITTGHAYSLILKAVASTKGCDSALDMFTELEAFSREKKDFDVI 155

Query: 643 TYNTMLSICSKENNWLQAERVWKKFKENGHKTTTLTY 753
            YNTM+S+C KE NW++ ER+W+  KEN +  T +TY
Sbjct: 156 VYNTMISVCGKEKNWVETERIWRSMKENDYHGTQVTY 192


>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Cucumis sativus]
          Length = 600

 Score =  187 bits (476), Expect = 2e-45
 Identities = 99/194 (51%), Positives = 132/194 (68%), Gaps = 1/194 (0%)
 Frame = +1

Query: 175 SYEQKLPPRGNAVNEEGIGFEVNGAEPISDYVSLVCEVETNLHFLEERDEEILSQRILGL 354
           S E KLPP G+  +++   F+             V E E+ LHFLEE D+ +LS+RIL L
Sbjct: 100 SREWKLPPWGDIAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVMLSKRILIL 159

Query: 355 SRSNKVRSSLELYKSMEASGLQPNAHSCNSLLACLLRNGFLNDALKIFEAMK-KEVTSGH 531
           SR NKVRS+LEL +SM+ +GL P+ H+ NSLLACLLRN    D L+IFE MK  E+++GH
Sbjct: 160 SRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFMKLNELSTGH 219

Query: 532 TYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNWLQAERVWK 711
           TYSL+LKAVA+  G+ SAL++F   E +     FDAI YNTM+SIC K+NNW++AER W+
Sbjct: 220 TYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDNNWVEAERTWR 279

Query: 712 KFKENGHKTTTLTY 753
             ++NG   T +TY
Sbjct: 280 LMEKNGCSATRITY 293