BLASTX nr result

ID: Coptis21_contig00033360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033360
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633602.1| PREDICTED: myosin-Vb-like [Vitis vinifera]         91   7e-17
emb|CBI18667.3| unnamed protein product [Vitis vinifera]               91   7e-17
gb|ABJ53198.1| myosin XI-F [Nicotiana benthamiana]                     79   3e-13
ref|XP_003595861.1| Myosin XI-F [Medicago truncatula] gi|3554849...    75   7e-12
ref|XP_004136104.1| PREDICTED: myosin-H heavy chain-like [Cucumi...    74   1e-11

>ref|XP_003633602.1| PREDICTED: myosin-Vb-like [Vitis vinifera]
          Length = 1601

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1    LLASTNEDLSEQVKLLESKIAELKSENELLRNQTPVIVQEPVSSEIFKTPVTKSFENGH- 177
            L+ASTNEDL E++K+L+ KIA L+SENE+LRNQ   I Q      +   P  KSF+NGH 
Sbjct: 1097 LVASTNEDLFEEMKILKDKIANLESENEVLRNQPTSIEQVAALERV--PPQVKSFDNGHK 1154

Query: 178  ITFELQTPKESERIDISLTKQKSLTDRQQENHD 276
            +  ELQT KE       LTKQ+SLTDRQQENHD
Sbjct: 1155 MEEELQTTKELVPFAPILTKQRSLTDRQQENHD 1187


>emb|CBI18667.3| unnamed protein product [Vitis vinifera]
          Length = 1587

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1    LLASTNEDLSEQVKLLESKIAELKSENELLRNQTPVIVQEPVSSEIFKTPVTKSFENGH- 177
            L+ASTNEDL E++K+L+ KIA L+SENE+LRNQ   I Q      +   P  KSF+NGH 
Sbjct: 1083 LVASTNEDLFEEMKILKDKIANLESENEVLRNQPTSIEQVAALERV--PPQVKSFDNGHK 1140

Query: 178  ITFELQTPKESERIDISLTKQKSLTDRQQENHD 276
            +  ELQT KE       LTKQ+SLTDRQQENHD
Sbjct: 1141 MEEELQTTKELVPFAPILTKQRSLTDRQQENHD 1173


>gb|ABJ53198.1| myosin XI-F [Nicotiana benthamiana]
          Length = 1569

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 13/105 (12%)
 Frame = +1

Query: 1    LLASTNEDLSEQVKLLESKIAELKSENELLRNQTPVIVQEPVSSE-----IFKTPVTKSF 165
            L+ASTNE LSE++ +L++KI  L+SENELLR Q  + V++ VSS+     +     T + 
Sbjct: 1050 LVASTNEALSEEMDILKNKIKNLESENELLRTQR-IAVEQIVSSDREPKGLETVDNTYTA 1108

Query: 166  ENGHITFEL--------QTPKESERIDISLTKQKSLTDRQQENHD 276
            +NGH T E+        Q PK+S    ISLTKQ+SLTDRQQENHD
Sbjct: 1109 DNGHQTVEVHEEIKMEQQIPKDSSP-PISLTKQRSLTDRQQENHD 1152


>ref|XP_003595861.1| Myosin XI-F [Medicago truncatula] gi|355484909|gb|AES66112.1| Myosin
            XI-F [Medicago truncatula]
          Length = 1611

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 21/113 (18%)
 Frame = +1

Query: 1    LLASTNEDLSEQVKLLESKIAELKSENELLRNQTPVIVQ--------------------E 120
            L+ S NEDLSE++K+L+ +I+ L+SENE LR+Q  V+V+                    +
Sbjct: 1058 LVESKNEDLSEEIKILKDQISNLESENECLRSQAAVVVEQKIHPEKTETDQEVSVVQQIQ 1117

Query: 121  PVSSEIFKTPVTKSFENGHITFELQTPKESERIDIS-LTKQKSLTDRQQENHD 276
            P S E   T   K  +NG+ T E    K+  R+ +S LTKQ+SLT+RQQE+HD
Sbjct: 1118 PRSIEDNMTTQIKDLDNGNKTEEEMHAKKEPRVAVSFLTKQRSLTERQQESHD 1170


>ref|XP_004136104.1| PREDICTED: myosin-H heavy chain-like [Cucumis sativus]
          Length = 1619

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1    LLASTNEDLSEQVKLLESKIAELKSENELLRNQTPVIVQEPVSSEIFKTPVTKSFENGH- 177
            L+A+ NE LSE+++ L+SKI  L++ENE+LRN+T  +   PV +       +K+ +NGH 
Sbjct: 1112 LVAADNESLSEELETLKSKIGSLEAENEVLRNRTVAVEHIPVPAAALTE--SKTLDNGHL 1169

Query: 178  ITFELQTPKESERIDISLTKQKSLTDRQQENHD 276
            I  E+++ KE   + I L KQ SLT++QQENHD
Sbjct: 1170 IEEEIKSTKEQSTVPI-LAKQGSLTEKQQENHD 1201


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