BLASTX nr result

ID: Coptis21_contig00033332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033332
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141804.1| PREDICTED: protein HOTHEAD-like [Cucumis sat...   113   2e-23
emb|CAN78644.1| hypothetical protein VITISV_031743 [Vitis vinifera]   110   1e-22
ref|XP_004146822.1| PREDICTED: protein HOTHEAD-like [Cucumis sat...   106   2e-21
emb|CBI35951.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_004155973.1| PREDICTED: protein HOTHEAD-like [Cucumis sat...   102   4e-20

>ref|XP_004141804.1| PREDICTED: protein HOTHEAD-like [Cucumis sativus]
          Length = 588

 Score =  113 bits (282), Expect = 2e-23
 Identities = 66/121 (54%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
 Frame = -2

Query: 358 MAFAWFLKLCHFVILLSF-SIQSGCQGAEVHLKYRYPFIKEASSFGXXXXXXXXXXXXXX 182
           MA A  +KL  F++L +   + S CQG E  +K RYPFIK ASSF               
Sbjct: 1   MALAGTVKLFLFLVLFTLLHLLSSCQGRENWIKSRYPFIKRASSF--------------- 45

Query: 181 XXTWKNRAAKK--YDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFDNRNVSHMENFH 8
              +++   +K  YDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPF N NVS + NFH
Sbjct: 46  ---YRDGHERKGGYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFTNANVSFLGNFH 102

Query: 7   L 5
           +
Sbjct: 103 I 103


>emb|CAN78644.1| hypothetical protein VITISV_031743 [Vitis vinifera]
          Length = 927

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/113 (53%), Positives = 71/113 (62%)
 Frame = -2

Query: 340 LKLCHFVILLSFSIQSGCQGAEVHLKYRYPFIKEASSFGXXXXXXXXXXXXXXXXTWKNR 161
           +KL     LL  S  + CQG E   +Y YPFI+ ASSF                    + 
Sbjct: 7   VKLFLLCSLLWLSAITSCQGKENSSEYPYPFIRRASSFSSSSPSASL-----------SG 55

Query: 160 AAKKYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFDNRNVSHMENFHLS 2
           +   YDYIIVGGGTAGCPLAATLSQNFSVLLLERGG PFDN NVS+++NFH+S
Sbjct: 56  SHNTYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGAPFDNVNVSYLKNFHIS 108


>ref|XP_004146822.1| PREDICTED: protein HOTHEAD-like [Cucumis sativus]
           gi|449515708|ref|XP_004164890.1| PREDICTED: protein
           HOTHEAD-like [Cucumis sativus]
          Length = 595

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/114 (53%), Positives = 69/114 (60%)
 Frame = -2

Query: 343 FLKLCHFVILLSFSIQSGCQGAEVHLKYRYPFIKEASSFGXXXXXXXXXXXXXXXXTWKN 164
           FL LC   ILLS S     QGA  + ++RYPFIK ASSF                     
Sbjct: 13  FLLLCLSFILLSHS----SQGARSYSEFRYPFIKRASSFSSLSSSTYS----------SG 58

Query: 163 RAAKKYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFDNRNVSHMENFHLS 2
                YDYIIVGGGTAGCPLAATLS+ F+VLLLERGGVPF N NVS + NFH++
Sbjct: 59  HGENVYDYIIVGGGTAGCPLAATLSKKFNVLLLERGGVPFANSNVSFLSNFHIA 112


>emb|CBI35951.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/115 (53%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
 Frame = -2

Query: 340 LKLCHFVILLSFSIQSGCQGA--EVHLKYRYPFIKEASSFGXXXXXXXXXXXXXXXXTWK 167
           +KL     LL  S  + CQG   E   +Y YPFI+ ASSF                    
Sbjct: 7   VKLFLLCSLLWLSAITSCQGLCKENSSEYPYPFIRRASSFSSSSPSASL----------- 55

Query: 166 NRAAKKYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFDNRNVSHMENFHLS 2
           + +   YDYIIVGGGTAGCPLAATLSQNFSVLLLERGG PFDN NVS+++NFH+S
Sbjct: 56  SGSHNTYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGAPFDNVNVSYLKNFHIS 110


>ref|XP_004155973.1| PREDICTED: protein HOTHEAD-like [Cucumis sativus]
          Length = 587

 Score =  102 bits (253), Expect = 4e-20
 Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
 Frame = -2

Query: 358 MAFAWFLKLCHFVILL---SFSIQSGCQGAEVHLKYRYPFIKEASSFGXXXXXXXXXXXX 188
           MA A  +KL  F++L    + S+       ++ +K RYPFIK ASSF             
Sbjct: 1   MALAGTVKLFLFLVLFISYTSSLLVKVGRGKIGIKSRYPFIKRASSF------------- 47

Query: 187 XXXXTWKNRAAKK--YDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFDNRNVSHMEN 14
                +++   +K  YDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPF N NVS + N
Sbjct: 48  -----YRDGHERKGGYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFTNANVSFLGN 102

Query: 13  FHL 5
           FH+
Sbjct: 103 FHI 105


Top