BLASTX nr result

ID: Coptis21_contig00033330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033330
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280214.1| PREDICTED: nudix hydrolase 8-like [Vitis vin...    68   9e-10
ref|XP_002514190.1| mutt domain protein, putative [Ricinus commu...    64   2e-08
ref|XP_002330497.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002280214.1| PREDICTED: nudix hydrolase 8-like [Vitis vinifera]
          Length = 346

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 6/77 (7%)
 Frame = +1

Query: 61  NSSFNNSKSLFQDRQLCKGGKAL------VVSPNISSPHTKLELLDAYDDEYEGVIIDPV 222
           NSS  NS S+       +GG  L      V+SP+ISSP   +E LDA++DEY+GV+I+P 
Sbjct: 49  NSSEPNSSSI----PSLRGGYVLRRKGIQVLSPHISSPSVPVEFLDAWEDEYDGVVINPE 104

Query: 223 CLPSSANAFASLLQASL 273
            LPSSANAFAS L+AS+
Sbjct: 105 NLPSSANAFASALRASM 121


>ref|XP_002514190.1| mutt domain protein, putative [Ricinus communis]
           gi|223546646|gb|EEF48144.1| mutt domain protein,
           putative [Ricinus communis]
          Length = 343

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = +1

Query: 130 VVSPNISSPHTKLELLDAYDDEYEGVIIDPVCLPSSANAFASLLQASL 273
           V SP++SSP  K+E+LDA DDEY G +IDP  LPSSANAFA+ L+ SL
Sbjct: 71  VTSPDVSSPGLKVEILDALDDEYGGCVIDPNSLPSSANAFATSLRFSL 118


>ref|XP_002330497.1| predicted protein [Populus trichocarpa] gi|222872431|gb|EEF09562.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = +1

Query: 130 VVSPNISSPHTKLEL--LDAYDDEYEGVIIDPVCLPSSANAFASLLQASL 273
           VVSP+ISSP     +  L+A+DDEY+GVIIDP  LPSSANAFAS L+A+L
Sbjct: 8   VVSPDISSPSPGFAVGFLEAFDDEYDGVIIDPNKLPSSANAFASALRAAL 57


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