BLASTX nr result

ID: Coptis21_contig00033303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033303
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Sela...   115   4e-24
ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Sela...   115   4e-24
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...   112   3e-23
emb|CBJ33858.1| conserved unknown protein [Ectocarpus siliculosus]    105   3e-21

>ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|222840828|gb|EEE78375.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/107 (60%), Positives = 78/107 (72%)
 Frame = +1

Query: 7   LVNGATGTIVDFVHHTGKKSWGAFAKCLLPKVRFDSGLECVIEPDEWHVMEGEKALATRK 186
           L NGATGT+  FV    K +    +  L P+V+FD G E +IEP ++ + EG+  +A R 
Sbjct: 346 LCNGATGTVTGFVPVEDKNA--RKSDILFPQVKFDRGPEILIEPQKFEIFEGDIVVAWRY 403

Query: 187 QIPLILAWAISIHKCQGMTLDCLHTDLSNAFGYGMVYVALSRVRNLQ 327
           QIPLILAWAISIHKCQGMTLD   TDLS AFGYGMVYVALSRVR+L+
Sbjct: 404 QIPLILAWAISIHKCQGMTLDHAQTDLSRAFGYGMVYVALSRVRSLE 450


>ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Selaginella moellendorffii]
           gi|300156832|gb|EFJ23459.1| hypothetical protein
           SELMODRAFT_451567 [Selaginella moellendorffii]
          Length = 580

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/109 (57%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
 Frame = +1

Query: 4   GLVNGATGTIVDFVHHTGKKSWGAFAKCLLPKVRFD--SGLECVIEPDEWHVMEGEKALA 177
           GLVNGA G +V F     K          LP VRF+     E +I P+ W VMEGE  +A
Sbjct: 444 GLVNGARGIVVGFTAPE-KSELRISPGGGLPVVRFNHSGSSEWIIRPEAWSVMEGEVEVA 502

Query: 178 TRKQIPLILAWAISIHKCQGMTLDCLHTDLSNAFGYGMVYVALSRVRNL 324
            R Q+PLILAWA+S+HKCQGMTLDC+ TDLS  F YGMVYVALSRVR+L
Sbjct: 503 KRLQLPLILAWALSVHKCQGMTLDCVETDLSRTFEYGMVYVALSRVRSL 551


>ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Selaginella moellendorffii]
           gi|300144841|gb|EFJ11522.1| hypothetical protein
           SELMODRAFT_451566 [Selaginella moellendorffii]
          Length = 580

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/109 (57%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
 Frame = +1

Query: 4   GLVNGATGTIVDFVHHTGKKSWGAFAKCLLPKVRFD--SGLECVIEPDEWHVMEGEKALA 177
           GLVNGA G +V F     K          LP VRF+     E +I P+ W VMEGE  +A
Sbjct: 444 GLVNGARGIVVGFTAPE-KSELRISPGGGLPVVRFNHSGSSEWIIRPEAWSVMEGEVEVA 502

Query: 178 TRKQIPLILAWAISIHKCQGMTLDCLHTDLSNAFGYGMVYVALSRVRNL 324
            R Q+PLILAWA+S+HKCQGMTLDC+ TDLS  F YGMVYVALSRVR+L
Sbjct: 503 KRLQLPLILAWALSVHKCQGMTLDCVETDLSRTFEYGMVYVALSRVRSL 551


>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
           gi|223540444|gb|EEF42013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 512

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/107 (53%), Positives = 73/107 (68%)
 Frame = +1

Query: 7   LVNGATGTIVDFVHHTGKKSWGAFAKCLLPKVRFDSGLECVIEPDEWHVMEGEKALATRK 186
           L NGATGT++ FV          F   LLP ++FDSG   VI+P +W   EG+  +A R 
Sbjct: 329 LCNGATGTVIGFVEPYDDVI-DLFPDNLLPVIKFDSGKVTVIKPQKWECYEGDDFVAWRS 387

Query: 187 QIPLILAWAISIHKCQGMTLDCLHTDLSNAFGYGMVYVALSRVRNLQ 327
           Q+PL LA+A+SIHKCQGMT+DCL+TDLS +F YGMVY  LSR R ++
Sbjct: 388 QLPLRLAYALSIHKCQGMTIDCLYTDLSRSFIYGMVYAVLSRGRTMK 434


>emb|CBJ33858.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 435

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/108 (54%), Positives = 74/108 (68%)
 Frame = +1

Query: 4   GLVNGATGTIVDFVHHTGKKSWGAFAKCLLPKVRFDSGLECVIEPDEWHVMEGEKALATR 183
           GL NG+ G +V F   T   S GA     LP VRF SGLE VI P+E+H+  G +A+A+R
Sbjct: 295 GLANGSRGVVVRFAKST---SSGA----RLPVVRFASGLEEVIRPEEFHLYVGGQAVASR 347

Query: 184 KQIPLILAWAISIHKCQGMTLDCLHTDLSNAFGYGMVYVALSRVRNLQ 327
           +Q+PL LAWA+S+HK QGM+LD     LS AF YG  YVALSRVR+L+
Sbjct: 348 RQLPLALAWALSVHKSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLE 395


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