BLASTX nr result

ID: Coptis21_contig00033296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033296
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511325.1| conserved hypothetical protein [Ricinus comm...   234   1e-59
ref|XP_002277671.2| PREDICTED: C2 and GRAM domain-containing pro...   233   4e-59
emb|CBI14958.3| unnamed protein product [Vitis vinifera]              232   7e-59
ref|XP_002321630.1| predicted protein [Populus trichocarpa] gi|2...   225   7e-57
ref|XP_003522401.1| PREDICTED: C2 and GRAM domain-containing pro...   213   3e-53

>ref|XP_002511325.1| conserved hypothetical protein [Ricinus communis]
           gi|223550440|gb|EEF51927.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1022

 Score =  234 bits (597), Expect = 1e-59
 Identities = 127/259 (49%), Positives = 167/259 (64%), Gaps = 11/259 (4%)
 Frame = +2

Query: 8   GKSPVMDSGKILLSLSFRGGNGDPSTDQFL--------PHIKEQDGQAELSHDTHSSSAL 163
           GK   MD+GKILL+LS  G   D +T+ F+           KE +G    S     S A 
Sbjct: 106 GKFINMDNGKILLTLSLHGKGHDFATNHFINANANPTDEGHKEYEGPYVSSGGMCCSKAP 165

Query: 164 SRKIPEGKKLVKAITSRIERIFKEEEDRKSETKTDDSSDLSCTNSDYEDCMDEPLSSCNF 343
             K+ +GKKL+K I SR+ER+F + E+     + D SS+ +  +SDYEDC +EP SSC+F
Sbjct: 166 LLKLTDGKKLMKTIASRLERVFNKNEEA---LRVDSSSESASASSDYEDCPEEPPSSCSF 222

Query: 344 EEAMKSMQWR---DDEFKMPEDLEGGILIDQTFVVSPNDLNSFLFMPNSEFRSELAELQG 514
           EEAM+ M      ++E +MPE+L GGIL+DQ + V   DLN FLF P+S+FR ++AE+QG
Sbjct: 223 EEAMEIMNSNGNEEEEEEMPENLHGGILLDQIYAVPSCDLNKFLFAPDSQFRKDIAEMQG 282

Query: 515 TTDLQEGPWTWKSGEGAHLTRAVTYLXXXXXXXXXXXXXEEQTYIKANGKGFAVFVTVST 694
           TTD++EGPWTWKS   +HLTR VTY              EEQTYI+A+G+ FAVFV VST
Sbjct: 283 TTDVEEGPWTWKSVNMSHLTRIVTYTKAATKLVKAVKATEEQTYIRADGRQFAVFVNVST 342

Query: 695 PDVPYGNCFKVELLYQIIP 751
           PDVPYG  F +ELLY+I+P
Sbjct: 343 PDVPYGRTFHIELLYKIVP 361


>ref|XP_002277671.2| PREDICTED: C2 and GRAM domain-containing protein At5g50170-like
           [Vitis vinifera]
          Length = 1021

 Score =  233 bits (593), Expect = 4e-59
 Identities = 129/257 (50%), Positives = 172/257 (66%), Gaps = 9/257 (3%)
 Frame = +2

Query: 8   GKSPVMDSGKILLSLSFRGGNGDPSTDQFL--------PHIKEQDGQAELSHDTHSSSAL 163
           GK    + GKILL++S  G + D + D  L           KE +G  E S D  SS+  
Sbjct: 109 GKFISKEYGKILLTISLHGRSQDTTADHPLYAHSRVKTRDFKEWEGLVE-SEDIVSSNTS 167

Query: 164 SRKIPEGKKLVKAITSRIERIFKEEEDRKSETKTDDSSDLSCTNSDYEDCMDEPLSSC-N 340
           + K+PEGK+L+KAI SR+E++  + E+    +K DDSS++S   SDYEDC++E   SC +
Sbjct: 168 TWKVPEGKQLMKAIASRLEKLLGKNEET---SKMDDSSEVSSIPSDYEDCIEEQRPSCCS 224

Query: 341 FEEAMKSMQWRDDEFKMPEDLEGGILIDQTFVVSPNDLNSFLFMPNSEFRSELAELQGTT 520
           FEEA++ MQ R+ E +MPE+L+GGIL+DQT++V+   LN  LF PNS+FR +LAELQ TT
Sbjct: 225 FEEAIELMQSRNGEQEMPENLQGGILLDQTYIVASKVLNMLLFAPNSQFRQDLAELQRTT 284

Query: 521 DLQEGPWTWKSGEGAHLTRAVTYLXXXXXXXXXXXXXEEQTYIKANGKGFAVFVTVSTPD 700
           +++EGPWTWKSG  + LTR V+Y              EEQTYIKA+G+ FAV V V TPD
Sbjct: 285 NMKEGPWTWKSGALSCLTRVVSYTQAATKLVKAVDALEEQTYIKADGREFAVLVNVDTPD 344

Query: 701 VPYGNCFKVELLYQIIP 751
           VPYGN FKVELLY+I+P
Sbjct: 345 VPYGNSFKVELLYKIMP 361


>emb|CBI14958.3| unnamed protein product [Vitis vinifera]
          Length = 1060

 Score =  232 bits (591), Expect = 7e-59
 Identities = 127/250 (50%), Positives = 170/250 (68%), Gaps = 9/250 (3%)
 Frame = +2

Query: 29  SGKILLSLSFRGGNGDPSTDQFL--------PHIKEQDGQAELSHDTHSSSALSRKIPEG 184
           +GKILL++S  G + D + D  L           KE +G  E S D  SS+  + K+PEG
Sbjct: 117 AGKILLTISLHGRSQDTTADHPLYAHSRVKTRDFKEWEGLVE-SEDIVSSNTSTWKVPEG 175

Query: 185 KKLVKAITSRIERIFKEEEDRKSETKTDDSSDLSCTNSDYEDCMDEPLSSC-NFEEAMKS 361
           K+L+KAI SR+E++  + E+    +K DDSS++S   SDYEDC++E   SC +FEEA++ 
Sbjct: 176 KQLMKAIASRLEKLLGKNEET---SKMDDSSEVSSIPSDYEDCIEEQRPSCCSFEEAIEL 232

Query: 362 MQWRDDEFKMPEDLEGGILIDQTFVVSPNDLNSFLFMPNSEFRSELAELQGTTDLQEGPW 541
           MQ R+ E +MPE+L+GGIL+DQT++V+   LN  LF PNS+FR +LAELQ TT+++EGPW
Sbjct: 233 MQSRNGEQEMPENLQGGILLDQTYIVASKVLNMLLFAPNSQFRQDLAELQRTTNMKEGPW 292

Query: 542 TWKSGEGAHLTRAVTYLXXXXXXXXXXXXXEEQTYIKANGKGFAVFVTVSTPDVPYGNCF 721
           TWKSG  + LTR V+Y              EEQTYIKA+G+ FAV V V TPDVPYGN F
Sbjct: 293 TWKSGALSCLTRVVSYTQAATKLVKAVDALEEQTYIKADGREFAVLVNVDTPDVPYGNSF 352

Query: 722 KVELLYQIIP 751
           KVELLY+I+P
Sbjct: 353 KVELLYKIMP 362


>ref|XP_002321630.1| predicted protein [Populus trichocarpa] gi|222868626|gb|EEF05757.1|
           predicted protein [Populus trichocarpa]
          Length = 1039

 Score =  225 bits (574), Expect = 7e-57
 Identities = 125/250 (50%), Positives = 158/250 (63%), Gaps = 7/250 (2%)
 Frame = +2

Query: 23  MDSGKILLSLSFRGGNGDPSTDQFL-------PHIKEQDGQAELSHDTHSSSALSRKIPE 181
           MD GKILLSLS        ST+ F+          KE +G    SH  H   A   KI E
Sbjct: 121 MDCGKILLSLSLSRKCDKSSTNHFVYANSNVNEDYKESEGPCISSHGMHGCKAPRVKIAE 180

Query: 182 GKKLVKAITSRIERIFKEEEDRKSETKTDDSSDLSCTNSDYEDCMDEPLSSCNFEEAMKS 361
           GKKL+K I SR+ER+F + E+    ++TDDSS+L+  +SD EDC  +  SSC+F E ++ 
Sbjct: 181 GKKLMKTIVSRLERVFNKHEEN---SRTDDSSELTSASSDCEDC--DHSSSCSFVEGLEI 235

Query: 362 MQWRDDEFKMPEDLEGGILIDQTFVVSPNDLNSFLFMPNSEFRSELAELQGTTDLQEGPW 541
           M  RD+E +MPE+L+GGIL+D+ +VV   DLN FLF PNS F  +L ELQGTTD +EGPW
Sbjct: 236 MSSRDNEQEMPENLQGGILLDKIYVVPSWDLNMFLFAPNSLFMKDLEELQGTTDAEEGPW 295

Query: 542 TWKSGEGAHLTRAVTYLXXXXXXXXXXXXXEEQTYIKANGKGFAVFVTVSTPDVPYGNCF 721
             KS   +HLTR V+Y              EEQTYIKA+GK FAV   VSTP+VPYGN F
Sbjct: 296 KRKSANMSHLTRTVSYTKAATKLVKSVKATEEQTYIKADGKEFAVLTNVSTPEVPYGNTF 355

Query: 722 KVELLYQIIP 751
            +ELLY+I+P
Sbjct: 356 NIELLYKILP 365


>ref|XP_003522401.1| PREDICTED: C2 and GRAM domain-containing protein At5g50170-like
           [Glycine max]
          Length = 1014

 Score =  213 bits (543), Expect = 3e-53
 Identities = 114/246 (46%), Positives = 159/246 (64%), Gaps = 6/246 (2%)
 Frame = +2

Query: 32  GKILLSLSFRGGNGDPSTDQFLPHIKEQ------DGQAELSHDTHSSSALSRKIPEGKKL 193
           GKILL++S  G         F+ H          D   +L     +      K+  GK+L
Sbjct: 120 GKILLTVSLHG----KGRSSFINHKHSSNSTIAVDNSRDLEGLHVACQVPCDKMGAGKQL 175

Query: 194 VKAITSRIERIFKEEEDRKSETKTDDSSDLSCTNSDYEDCMDEPLSSCNFEEAMKSMQWR 373
           +KAI + + RIFK++E+    +K+ DSS+LS + SDYED + E  S C+FEEA+  M+  
Sbjct: 176 LKAIANGLHRIFKKKEEN---SKSGDSSELSTSLSDYEDSVQENSSPCSFEEAIALMESG 232

Query: 374 DDEFKMPEDLEGGILIDQTFVVSPNDLNSFLFMPNSEFRSELAELQGTTDLQEGPWTWKS 553
           DD+ +MPE+L GG+L+DQ ++VSPNDLN FLF PNS+F  ++ ELQGTT++QEGPWTWK+
Sbjct: 233 DDKPEMPENLPGGVLVDQIYLVSPNDLNVFLFAPNSQFSKDMVELQGTTNVQEGPWTWKN 292

Query: 554 GEGAHLTRAVTYLXXXXXXXXXXXXXEEQTYIKANGKGFAVFVTVSTPDVPYGNCFKVEL 733
           G+ + LTR VTY              EEQTYI+ + K FA+ V+VSTP+VPYGN F++EL
Sbjct: 293 GDMSCLTRVVTYTKAATKLIKAVNAIEEQTYIRVSRKEFAILVSVSTPEVPYGNSFRIEL 352

Query: 734 LYQIIP 751
           LY+I+P
Sbjct: 353 LYKIMP 358


Top