BLASTX nr result

ID: Coptis21_contig00033291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033291
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2...   154   9e-36
emb|CBI40445.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1...   154   9e-36
ref|XP_002320829.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_002511931.1| Structural maintenance of chromosome 1 prote...   147   1e-33

>ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2 [Vitis vinifera]
          Length = 776

 Score =  154 bits (388), Expect = 9e-36
 Identities = 78/106 (73%), Positives = 93/106 (87%)
 Frame = -3

Query: 319 EHEESDKMDEDSRVIEELQQNCNHQRAHILHLEKALKQAIESQDEVKKMNSDELQKSKEV 140
           E EES+KMDEDS++IEEL+QN  +QRA IL+LEKALKQAI  QDE+K +NS ELQKSKE+
Sbjct: 402 ESEESEKMDEDSKIIEELRQNNEYQRAQILNLEKALKQAIARQDEIKMLNSSELQKSKEI 461

Query: 139 VNDLKQKLASCVKTIDAKHSELLNLQTALGQYYAESEAKERLERDL 2
           ++DL +KLAS + T+DAK+ ELLNLQTALGQYYAE EAKERLERDL
Sbjct: 462 IDDLNKKLASYMCTLDAKNVELLNLQTALGQYYAEMEAKERLERDL 507


>emb|CBI40445.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  154 bits (388), Expect = 9e-36
 Identities = 78/106 (73%), Positives = 93/106 (87%)
 Frame = -3

Query: 319 EHEESDKMDEDSRVIEELQQNCNHQRAHILHLEKALKQAIESQDEVKKMNSDELQKSKEV 140
           E EES+KMDEDS++IEEL+QN  +QRA IL+LEKALKQAI  QDE+K +NS ELQKSKE+
Sbjct: 415 ESEESEKMDEDSKIIEELRQNNEYQRAQILNLEKALKQAIARQDEIKMLNSSELQKSKEI 474

Query: 139 VNDLKQKLASCVKTIDAKHSELLNLQTALGQYYAESEAKERLERDL 2
           ++DL +KLAS + T+DAK+ ELLNLQTALGQYYAE EAKERLERDL
Sbjct: 475 IDDLNKKLASYMCTLDAKNVELLNLQTALGQYYAEMEAKERLERDL 520


>ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1 [Vitis vinifera]
          Length = 790

 Score =  154 bits (388), Expect = 9e-36
 Identities = 78/106 (73%), Positives = 93/106 (87%)
 Frame = -3

Query: 319 EHEESDKMDEDSRVIEELQQNCNHQRAHILHLEKALKQAIESQDEVKKMNSDELQKSKEV 140
           E EES+KMDEDS++IEEL+QN  +QRA IL+LEKALKQAI  QDE+K +NS ELQKSKE+
Sbjct: 416 ESEESEKMDEDSKIIEELRQNNEYQRAQILNLEKALKQAIARQDEIKMLNSSELQKSKEI 475

Query: 139 VNDLKQKLASCVKTIDAKHSELLNLQTALGQYYAESEAKERLERDL 2
           ++DL +KLAS + T+DAK+ ELLNLQTALGQYYAE EAKERLERDL
Sbjct: 476 IDDLNKKLASYMCTLDAKNVELLNLQTALGQYYAEMEAKERLERDL 521


>ref|XP_002320829.1| predicted protein [Populus trichocarpa] gi|222861602|gb|EEE99144.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/106 (68%), Positives = 92/106 (86%)
 Frame = -3

Query: 319 EHEESDKMDEDSRVIEELQQNCNHQRAHILHLEKALKQAIESQDEVKKMNSDELQKSKEV 140
           E EES+KMDEDS++IEEL+Q+  +Q+A ILHLEKALKQAI  Q+EV+ MNS+E+QKSKE+
Sbjct: 402 ESEESEKMDEDSKIIEELRQSNEYQKAQILHLEKALKQAIAGQEEVRMMNSNEIQKSKEM 461

Query: 139 VNDLKQKLASCVKTIDAKHSELLNLQTALGQYYAESEAKERLERDL 2
             DLK+KLA+C+ TI++K+ ELLNLQTALGQY+AE EAKE LER L
Sbjct: 462 TEDLKKKLANCMSTIESKNVELLNLQTALGQYFAEVEAKEYLERQL 507


>ref|XP_002511931.1| Structural maintenance of chromosome 1 protein, putative [Ricinus
           communis] gi|223549111|gb|EEF50600.1| Structural
           maintenance of chromosome 1 protein, putative [Ricinus
           communis]
          Length = 755

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/106 (65%), Positives = 95/106 (89%)
 Frame = -3

Query: 319 EHEESDKMDEDSRVIEELQQNCNHQRAHILHLEKALKQAIESQDEVKKMNSDELQKSKEV 140
           E+EES+KMDEDS++IEEL++N  +Q+A +LHLEKALKQAI +Q+EV+ +N++E+QKSKE+
Sbjct: 380 ENEESEKMDEDSKIIEELRENNEYQKAQVLHLEKALKQAIANQEEVRMINNNEIQKSKEI 439

Query: 139 VNDLKQKLASCVKTIDAKHSELLNLQTALGQYYAESEAKERLERDL 2
           + DL +KLA+C+  ID+K+ ELLNLQTALGQY+AE EAKE+LER+L
Sbjct: 440 IEDLNKKLANCMSIIDSKNVELLNLQTALGQYFAEIEAKEQLERNL 485


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