BLASTX nr result

ID: Coptis21_contig00033288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033288
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512822.1| ATP binding protein, putative [Ricinus commu...   119   3e-25
ref|XP_002321080.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonin...   116   2e-24
ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonin...   107   8e-22
ref|XP_003624516.1| Receptor-like-kinase [Medicago truncatula] g...   104   8e-21

>ref|XP_002512822.1| ATP binding protein, putative [Ricinus communis]
           gi|223547833|gb|EEF49325.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1050

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/126 (46%), Positives = 78/126 (61%)
 Frame = +1

Query: 1   GIPPXXXXXXXXXXXWAPRANLGGRLPSNWSASCKLHVVNLGQNYFTGLIPRGMGLCRNX 180
           GIP            WAPRANLGGRLPS+W   C L VV+LG N+F G++P+G+G+C+N 
Sbjct: 300 GIPFEVLMLPSLQILWAPRANLGGRLPSSWGDLCSLRVVHLGFNFFKGVVPKGLGMCKNL 359

Query: 181 XXXXXXXXXXXXXIPSQLPVPCMVYFNVSRNSLSGHLPRFPMTSCASSMISSYSQDGNFV 360
                        +P QL VPCMVYFNVS+N++S  LP F   SC +SMI  + QD +F+
Sbjct: 360 TFLDLSSNYLVGYLPMQLQVPCMVYFNVSQNNMSRALPSFQKGSCDASMI-LFGQDHSFL 418

Query: 361 EKQYIR 378
           + + +R
Sbjct: 419 DMEDVR 424


>ref|XP_002321080.1| predicted protein [Populus trichocarpa] gi|222861853|gb|EEE99395.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/119 (47%), Positives = 73/119 (61%)
 Frame = +1

Query: 1   GIPPXXXXXXXXXXXWAPRANLGGRLPSNWSASCKLHVVNLGQNYFTGLIPRGMGLCRNX 180
           G+P            WAPRANL GRLP NWS SC L V++LGQN   G++P+G+ +C+N 
Sbjct: 313 GVPQEVLMLPSLQILWAPRANLDGRLPDNWSDSCSLRVLHLGQNSLRGVVPKGLVMCKNL 372

Query: 181 XXXXXXXXXXXXXIPSQLPVPCMVYFNVSRNSLSGHLPRFPMTSCASSMISSYSQDGNF 357
                        +P QL VPCM+YFNVS+N++SG +P F   SC +S+I SY QD NF
Sbjct: 373 TFLDLSSNYLTGDLPMQLQVPCMMYFNVSQNNISGAVPTFGKGSCDTSII-SYGQDPNF 430


>ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2
           [Vitis vinifera] gi|147802220|emb|CAN68268.1|
           hypothetical protein VITISV_029909 [Vitis vinifera]
          Length = 1066

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/126 (46%), Positives = 72/126 (57%)
 Frame = +1

Query: 1   GIPPXXXXXXXXXXXWAPRANLGGRLPSNWSASCKLHVVNLGQNYFTGLIPRGMGLCRNX 180
           G+P            WAPRANLGGRLPSNWS SC L  +NLGQNY +  +P  MG C+N 
Sbjct: 311 GVPYELLLLPKLQIFWAPRANLGGRLPSNWSDSCSLRALNLGQNYISAAVPESMGKCKNL 370

Query: 181 XXXXXXXXXXXXXIPSQLPVPCMVYFNVSRNSLSGHLPRFPMTSCASSMISSYSQDGNFV 360
                        +P Q   PCMVYFN+SRN L+G LPRF   SC S M+ SY Q   F+
Sbjct: 371 TFLDLSSNVLEGYLPFQWLFPCMVYFNISRNMLTGVLPRFGKESCHSIMV-SYGQAPIFL 429

Query: 361 EKQYIR 378
           + + I+
Sbjct: 430 DVEDIQ 435


>ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like, partial [Glycine max]
          Length = 1022

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
 Frame = +1

Query: 46  WAPRANLGGRLPSNWSASCKLHVVNLGQNYFTGLIPRGMGLCRNXXXXXXXXXXXXXXIP 225
           WAPRANLGGRLPS WS  C L V+NL QNY  G++P  +G+CRN              +P
Sbjct: 290 WAPRANLGGRLPSGWSDLCSLRVLNLAQNYVAGVVPESLGMCRNLSFLDLSSNILVGYLP 349

Query: 226 S-QLPVPCMVYFNVSRNSLSGHLPRFPMTSCASSMISSYSQDGNFVE 363
           S QL VPCM+YFN+SRN++SG L  F   SC +S +     D +F+E
Sbjct: 350 SLQLRVPCMMYFNISRNNISGTLQGFRNESCGASAL-----DASFLE 391


>ref|XP_003624516.1| Receptor-like-kinase [Medicago truncatula]
           gi|355499531|gb|AES80734.1| Receptor-like-kinase
           [Medicago truncatula]
          Length = 1131

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/95 (54%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
 Frame = +1

Query: 46  WAPRANLGGRLPS-NWSASCKLHVVNLGQNYFTGLIPRGMGLCRNXXXXXXXXXXXXXXI 222
           WAPRANLGGRLP+  WS SC L V+NL QNY TG++P  +G+CRN              +
Sbjct: 385 WAPRANLGGRLPAAGWSDSCSLKVLNLAQNYVTGVVPESLGMCRNLTFLDLSSNNLVGHL 444

Query: 223 PSQ-LPVPCMVYFNVSRNSLSGHLPRFPMTSCASS 324
           P Q L VPCM YFNVSRN++SG LP F    C SS
Sbjct: 445 PLQHLRVPCMTYFNVSRNNISGTLPGFMKERCRSS 479


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