BLASTX nr result

ID: Coptis21_contig00033279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033279
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]     86   3e-15
emb|CAN82873.1| hypothetical protein VITISV_019905 [Vitis vinifera]    86   4e-15
emb|CAN77607.1| hypothetical protein VITISV_014680 [Vitis vinifera]    84   2e-14
emb|CAN73553.1| hypothetical protein VITISV_021946 [Vitis vinifera]    83   2e-14
emb|CAN71101.1| hypothetical protein VITISV_007818 [Vitis vinifera]    83   3e-14

>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/101 (38%), Positives = 60/101 (59%)
 Frame = +3

Query: 39  VSPYQVKLMVFPFTLADKATSWLTAQMQNSVDSWAKLVQLFMEQFYPPLKTNEMFQKIHF 218
           VS   +KL +FPF+L DKA +WL +    S+ +W +L + F+ +++PP KT ++  +I  
Sbjct: 4   VSDDAIKLRLFPFSLRDKARAWLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITT 63

Query: 219 FHQNPHESFSEAWNHFTNLLIECPHHNLAKDTLVHAFSKGL 341
           F Q   ES  +AW  + +LL  CPHH L    ++H F  GL
Sbjct: 64  FTQKEGESLYDAWERYKDLLRMCPHHGLEDWLIIHTFYNGL 104


>emb|CAN82873.1| hypothetical protein VITISV_019905 [Vitis vinifera]
          Length = 1705

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/120 (35%), Positives = 63/120 (52%)
 Frame = +3

Query: 6   EQVLTTFHHPTVSPYQVKLMVFPFTLADKATSWLTAQMQNSVDSWAKLVQLFMEQFYPPL 185
           E V  TFH    S   ++L +FPFTL DKA  WL +    S+ SW  L   F+++F+P  
Sbjct: 104 EDVCNTFHEGGASIDLMRLKLFPFTLKDKAKIWLNSLRPRSIRSWTNLQAEFLKKFFPTH 163

Query: 186 KTNEMFQKIHFFHQNPHESFSEAWNHFTNLLIECPHHNLAKDTLVHAFSKGLSHYHKEVL 365
           +TN + ++I  F    +E F E W  +   +  CPHH+     LV  F  G+S   K++L
Sbjct: 164 RTNGLKRQISNFSAKENEKFYECWERYMEAINACPHHDFDTWLLVSYFYDGMSSLMKQLL 223


>emb|CAN77607.1| hypothetical protein VITISV_014680 [Vitis vinifera]
          Length = 1853

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/120 (35%), Positives = 61/120 (50%)
 Frame = +3

Query: 6   EQVLTTFHHPTVSPYQVKLMVFPFTLADKATSWLTAQMQNSVDSWAKLVQLFMEQFYPPL 185
           E V  TF     S   +KL +FPFTL DKA  WL +    S+ SW  L   F+++F+P  
Sbjct: 104 EDVCNTFQEGGASIDLMKLKLFPFTLKDKAKIWLNSLRPRSIRSWTDLQAEFLKKFFPTH 163

Query: 186 KTNEMFQKIHFFHQNPHESFSEAWNHFTNLLIECPHHNLAKDTLVHAFSKGLSHYHKEVL 365
           +TN + ++I  F    +E F E W  +   +  CPHH      LV  F  G+S   K++L
Sbjct: 164 RTNGLKRQISNFSAKENEKFYECWERYMEAINACPHHGFDTXLLVSYFYDGMSSSMKQLL 223


>emb|CAN73553.1| hypothetical protein VITISV_021946 [Vitis vinifera]
          Length = 174

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/120 (35%), Positives = 63/120 (52%)
 Frame = +3

Query: 6   EQVLTTFHHPTVSPYQVKLMVFPFTLADKATSWLTAQMQNSVDSWAKLVQLFMEQFYPPL 185
           E+V  TF     S   ++L +FPFTL DKA  WL +    S+ SW  L   F+++F+P  
Sbjct: 14  EEVCNTFREGGASIDLMRLKLFPFTLKDKAKVWLNSLRPRSIRSWTDLHAEFLKKFFPTH 73

Query: 186 KTNEMFQKIHFFHQNPHESFSEAWNHFTNLLIECPHHNLAKDTLVHAFSKGLSHYHKEVL 365
           +TN++ ++I  F    +E F E W  +   +  CPHH      LV  F  G+S   K++L
Sbjct: 74  RTNDLKRQISDFSAKENEKFYECWERYMEAINTCPHHGFDTWLLVSYFYDGMSFSMKQLL 133


>emb|CAN71101.1| hypothetical protein VITISV_007818 [Vitis vinifera]
          Length = 1068

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/120 (35%), Positives = 61/120 (50%)
 Frame = +3

Query: 6   EQVLTTFHHPTVSPYQVKLMVFPFTLADKATSWLTAQMQNSVDSWAKLVQLFMEQFYPPL 185
           E V  TF     S   ++L +FPFTL DKA  WL      S+ SW  L   F+++F+P  
Sbjct: 52  EDVCNTFQEGGASINLIRLKLFPFTLKDKAKVWLNYLRPRSIRSWTDLQAEFLKKFFPTH 111

Query: 186 KTNEMFQKIHFFHQNPHESFSEAWNHFTNLLIECPHHNLAKDTLVHAFSKGLSHYHKEVL 365
           +TN++ ++I  F    +E F E W  +   +  CPHH      LV  F  G+S   K++L
Sbjct: 112 RTNDLKRQISNFSAKENEKFYECWERYMEAINACPHHGFDTWLLVSYFYDGMSSSMKQLL 171


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