BLASTX nr result

ID: Coptis21_contig00033271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033271
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78766.1| hypothetical protein VITISV_044397 [Vitis vinifera]   263   5e-68
ref|XP_002263999.1| PREDICTED: transcription factor bHLH35 [Viti...   262   6e-68
ref|XP_003595077.1| Transcription factor bHLH [Medicago truncatu...   261   2e-67
ref|NP_001239951.1| uncharacterized protein LOC100817978 [Glycin...   256   4e-66
ref|XP_002308110.1| predicted protein [Populus trichocarpa] gi|2...   253   5e-65

>emb|CAN78766.1| hypothetical protein VITISV_044397 [Vitis vinifera]
          Length = 805

 Score =  263 bits (671), Expect = 5e-68
 Identities = 142/223 (63%), Positives = 166/223 (74%), Gaps = 4/223 (1%)
 Frame = +1

Query: 121 EDYNQYWETKMFFQAEELDSWGW-DEAFSGYYDXXXXXXXXXXXXXXKNIISERNRRKKL 297
           E++  YWET MF Q+EE DSWG  DEAFSGYYD              KNI+SERNRRKKL
Sbjct: 5   EEFKNYWETNMFLQSEEFDSWGGLDEAFSGYYDSSSPDGAASSAAS-KNIVSERNRRKKL 63

Query: 298 NERLFALRAVVPNISKMDKASIIKDAIEYIQELHGQERVIQAEILELEAERLKNPISNID 477
           NERLFALRAVVPNISKMDKASIIKDAI+YIQ+LH QER IQAEI ELE+ + K      +
Sbjct: 64  NERLFALRAVVPNISKMDKASIIKDAIDYIQDLHEQERRIQAEISELESGKSKKSPPGYE 123

Query: 478 LENEYFV---KPKKNRIAECSESGGSKTSSIDIVELRVTYVGERTLFISLTCDKKTDTMV 648
            + E  V   K KK R   C +SGGS+ S I+++ELRV Y+GE+T+ +SLTC K+TDTMV
Sbjct: 124 FDQEIPVLVSKSKKKRTQHCYDSGGSRVSPIEVLELRVVYMGEKTVVVSLTCSKRTDTMV 183

Query: 649 KLCEVFESLKLKIITANITSLSGKLLKTVFVEVSNRPAILQFK 777
           KLCEVFESLKLKIITANIT+ SG+LLKTVFVE+   P  L F+
Sbjct: 184 KLCEVFESLKLKIITANITAFSGRLLKTVFVEI---PPYLPFR 223


>ref|XP_002263999.1| PREDICTED: transcription factor bHLH35 [Vitis vinifera]
           gi|297735470|emb|CBI17910.3| unnamed protein product
           [Vitis vinifera]
          Length = 244

 Score =  262 bits (670), Expect = 6e-68
 Identities = 144/236 (61%), Positives = 169/236 (71%), Gaps = 4/236 (1%)
 Frame = +1

Query: 121 EDYNQYWETKMFFQAEELDSWGW-DEAFSGYYDXXXXXXXXXXXXXXKNIISERNRRKKL 297
           E++  YWET MF Q+EE DSWG  DEAFSGYYD              KNI+SERNRRKKL
Sbjct: 5   EEFKNYWETNMFLQSEEFDSWGGLDEAFSGYYDSSSPDGAASSAAS-KNIVSERNRRKKL 63

Query: 298 NERLFALRAVVPNISKMDKASIIKDAIEYIQELHGQERVIQAEILELEAERLKNPISNID 477
           NERLFALRAVVPNISKMDKASIIKDAI+YIQ+LH QER IQAEI ELE+ + K      +
Sbjct: 64  NERLFALRAVVPNISKMDKASIIKDAIDYIQDLHEQERRIQAEISELESGKSKKSPPGYE 123

Query: 478 LENEYFV---KPKKNRIAECSESGGSKTSSIDIVELRVTYVGERTLFISLTCDKKTDTMV 648
            + E  V   K KK R   C +SGGS+ S I+++ELRV Y+GE+T+ +SLTC K+TDTMV
Sbjct: 124 FDQEIPVLVSKSKKKRTQHCYDSGGSRVSPIEVLELRVVYMGEKTVVVSLTCSKRTDTMV 183

Query: 649 KLCEVFESLKLKIITANITSLSGKLLKTVFVEVSNRPAILQFKLPIHQFL*LLNHP 816
           KLCEVFESLKLKIITANIT+ SG+LLKTVFVE       +  K+ I   +  LN P
Sbjct: 184 KLCEVFESLKLKIITANITAFSGRLLKTVFVEADEEEKDV-LKIKIETAIAALNDP 238


>ref|XP_003595077.1| Transcription factor bHLH [Medicago truncatula]
           gi|355484125|gb|AES65328.1| Transcription factor bHLH
           [Medicago truncatula]
          Length = 244

 Score =  261 bits (666), Expect = 2e-67
 Identities = 141/234 (60%), Positives = 167/234 (71%), Gaps = 2/234 (0%)
 Frame = +1

Query: 121 EDYNQYWETKMFFQAEELDSWGWDEAFSGYYDXXXXXXXXXXXXXXKNIISERNRRKKLN 300
           ++Y  YWET MFFQ +ELDSWG DEA S YYD              KNI+SERNRRKKLN
Sbjct: 6   DEYKHYWETNMFFQTQELDSWGLDEALSAYYDSSSPDGAASSGVSSKNIVSERNRRKKLN 65

Query: 301 ERLFALRAVVPNISKMDKASIIKDAIEYIQELHGQERVIQAEILELEAERLK--NPISNI 474
           ERLFALRAVVPNISKMDKASIIKDAIEYIQ LH QE+VIQAEI+ELE+      NP  + 
Sbjct: 66  ERLFALRAVVPNISKMDKASIIKDAIEYIQLLHEQEKVIQAEIMELESGMPNNINPSYDF 125

Query: 475 DLENEYFVKPKKNRIAECSESGGSKTSSIDIVELRVTYVGERTLFISLTCDKKTDTMVKL 654
           D E    ++ KK R  +  +S  S+   I+++ELRVTY+GE T+ +SLTC+K+ DTMVKL
Sbjct: 126 DQELPMLLRSKKKRTDQLYDSVSSRNFPIEVLELRVTYMGENTMVVSLTCNKRADTMVKL 185

Query: 655 CEVFESLKLKIITANITSLSGKLLKTVFVEVSNRPAILQFKLPIHQFL*LLNHP 816
           CEVFESLKLKIITANITS SG+LLKTVF+E +N     Q +  I   +  LN P
Sbjct: 186 CEVFESLKLKIITANITSFSGRLLKTVFIE-ANEEDKDQLQTNIQTAIAALNDP 238


>ref|NP_001239951.1| uncharacterized protein LOC100817978 [Glycine max]
           gi|255641230|gb|ACU20892.1| unknown [Glycine max]
          Length = 244

 Score =  256 bits (654), Expect = 4e-66
 Identities = 139/236 (58%), Positives = 171/236 (72%), Gaps = 2/236 (0%)
 Frame = +1

Query: 121 EDYNQYWETKMFFQAEELDSWGWDEAFSGYYDXXXXXXXXXXXXXXKNIISERNRRKKLN 300
           E+Y  YWET MF Q +ELDSWG DEA SGYYD              KNI+SERNRRKKLN
Sbjct: 6   EEYKHYWETNMFLQTQELDSWGLDEALSGYYDSSSPDGAASSAAS-KNIVSERNRRKKLN 64

Query: 301 ERLFALRAVVPNISKMDKASIIKDAIEYIQELHGQERVIQAEILELEAER-LKNPISNID 477
           ERLFALR+VVPNISKMDKASIIKDAIEYIQ LH QE++IQAEI+ELE+    K+P    +
Sbjct: 65  ERLFALRSVVPNISKMDKASIIKDAIEYIQHLHEQEKIIQAEIMELESGMPRKSPSYGFE 124

Query: 478 LEN-EYFVKPKKNRIAECSESGGSKTSSIDIVELRVTYVGERTLFISLTCDKKTDTMVKL 654
            E     ++ KK R  +  +S  S+ + I+++ELRVTY+GE+T+ +SLTC K+TDTMVKL
Sbjct: 125 QEQLPVVLRSKKKRTEQLYDSVTSRNTPIEVLELRVTYMGEKTVVVSLTCSKRTDTMVKL 184

Query: 655 CEVFESLKLKIITANITSLSGKLLKTVFVEVSNRPAILQFKLPIHQFL*LLNHPPI 822
           CEVFESLKLKIITANITS SG+LLKTVF+E +N       ++ I   +  LN+ P+
Sbjct: 185 CEVFESLKLKIITANITSFSGRLLKTVFIE-ANEEEKDHLQIKIQTAIKALNNDPL 239


>ref|XP_002308110.1| predicted protein [Populus trichocarpa] gi|222854086|gb|EEE91633.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  253 bits (645), Expect = 5e-65
 Identities = 135/212 (63%), Positives = 159/212 (75%), Gaps = 4/212 (1%)
 Frame = +1

Query: 121 EDYNQYWETKMFFQAEELDSWGWDEAFSGYYDXXXXXXXXXXXXXXKNIISERNRRKKLN 300
           E+Y  YWETKMF Q EE DSW  DEAFSGYYD              KNI+SERNRRK+LN
Sbjct: 9   EEYQNYWETKMFLQNEEFDSWAIDEAFSGYYDSSSPDGAASSAAS-KNIVSERNRRKRLN 67

Query: 301 ERLFALRAVVPNISKMDKASIIKDAIEYIQELHGQERVIQAEILELEAERLKNPISNIDL 480
           ERLFALRAVVPNISKMDKASIIKDAI+YIQELH QER IQAEILELE+ +LK        
Sbjct: 68  ERLFALRAVVPNISKMDKASIIKDAIDYIQELHKQERRIQAEILELESGKLKKDPGFDVF 127

Query: 481 ENEY--FVKPKKNRIAE--CSESGGSKTSSIDIVELRVTYVGERTLFISLTCDKKTDTMV 648
           E E    ++ KK +I +  C   G    S I+++ELRV Y+GE+TL +SLTC K+TDTMV
Sbjct: 128 EQELPALLRSKKKKIDDRFCDFGGSKNFSRIELLELRVAYMGEKTLLVSLTCSKRTDTMV 187

Query: 649 KLCEVFESLKLKIITANITSLSGKLLKTVFVE 744
           KLCEVFESL++KIITANIT++SG++LKTVF+E
Sbjct: 188 KLCEVFESLRVKIITANITTVSGRVLKTVFIE 219


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