BLASTX nr result

ID: Coptis21_contig00033257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033257
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   104   9e-21
emb|CBI23992.3| unnamed protein product [Vitis vinifera]              104   9e-21
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]   104   9e-21
ref|XP_002271013.2| PREDICTED: glutamate receptor 2.7-like [Viti...   102   4e-20
ref|XP_002273232.2| PREDICTED: glutamate receptor 2.8-like [Viti...   101   7e-20

>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/99 (53%), Positives = 72/99 (72%)
 Frame = -3

Query: 298 IMFLVLVLTSIQLAKARDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDFYAIHDNYK 119
           + FL L +  I++  A++     PV+VGV+LD DTS GK+   C+ MA+SDFYA H NYK
Sbjct: 12  LFFLSLWVLFIEMGMAQNT--TIPVNVGVVLDFDTSFGKMGLSCIPMALSDFYASHGNYK 69

Query: 118 TRLVLHTRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKS 2
           TRLVL TRDS+ D++ AA AA+DL+++ +VQAIIGP  S
Sbjct: 70  TRLVLKTRDSRRDVVGAAAAALDLIQNEEVQAIIGPGSS 108


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/99 (53%), Positives = 72/99 (72%)
 Frame = -3

Query: 298 IMFLVLVLTSIQLAKARDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDFYAIHDNYK 119
           + FL L +  I++  A++     PV+VGV+LD DTS GK+   C+ MA+SDFYA H NYK
Sbjct: 12  LFFLSLWVLFIEMGMAQNT--TIPVNVGVVLDFDTSFGKMGLSCIPMALSDFYASHGNYK 69

Query: 118 TRLVLHTRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKS 2
           TRLVL TRDS+ D++ AA AA+DL+++ +VQAIIGP  S
Sbjct: 70  TRLVLKTRDSRRDVVGAAAAALDLIQNEEVQAIIGPGSS 108


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/99 (53%), Positives = 72/99 (72%)
 Frame = -3

Query: 298 IMFLVLVLTSIQLAKARDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDFYAIHDNYK 119
           + FL L +  I++  A++     PV+VGV+LD DTS GK+   C+ MA+SDFYA H NYK
Sbjct: 12  LFFLSLWVLFIEMGMAQNT--TIPVNVGVVLDFDTSFGKMGLSCIPMALSDFYASHGNYK 69

Query: 118 TRLVLHTRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKS 2
           TRLVL TRDS+ D++ AA AA+DL+++ +VQAIIGP  S
Sbjct: 70  TRLVLKTRDSRRDVVGAAAAALDLIQNEEVQAIIGPGSS 108


>ref|XP_002271013.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 920

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/103 (51%), Positives = 74/103 (71%)
 Frame = -3

Query: 310 PVHVIMFLVLVLTSIQLAKARDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDFYAIH 131
           P+ ++  L L +  I++A +++     PV VGV+LDMDT +GK+   C+ MA+SDFYA H
Sbjct: 9   PLFLLCCLSLWIFFIEMAMSQNT--TIPVKVGVVLDMDTWLGKMGLSCITMALSDFYASH 66

Query: 130 DNYKTRLVLHTRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKS 2
            +YKTRLVL  RDSK D++ AA AA+DLL++ +VQAIIGP  S
Sbjct: 67  GHYKTRLVLEIRDSKRDVVGAAAAALDLLQNEEVQAIIGPASS 109


>ref|XP_002273232.2| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 1056

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/103 (51%), Positives = 74/103 (71%)
 Frame = -3

Query: 310 PVHVIMFLVLVLTSIQLAKARDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDFYAIH 131
           P+ ++  L L +  I++A +++     PV VGV+LDMDT +GK+   C+ MA+SDFYA H
Sbjct: 9   PLFLLCCLSLWIFFIEMAMSQNT--TIPVKVGVVLDMDTWLGKMGLSCITMALSDFYASH 66

Query: 130 DNYKTRLVLHTRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKS 2
            +YKTRLVL  RDSK D++ AA AA+DLL++ +VQAIIGP  S
Sbjct: 67  GHYKTRLVLEIRDSKRDVMGAAAAALDLLQNEEVQAIIGPASS 109


Top