BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033255
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   258   4e-67
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   250   1e-64
ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-64
ref|XP_002522236.1| pentatricopeptide repeat-containing protein,...   247   9e-64
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   241   5e-62

>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  258 bits (660), Expect = 4e-67
 Identities = 121/192 (63%), Positives = 154/192 (80%)
 Frame = -3

Query: 577 SFDGEIIVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELF 398
           SF  E+ +NN L+DMY+K G+LNSA++VF  +  RSVVSWTSM+AGYAR G  D ++ LF
Sbjct: 281 SFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLF 340

Query: 397 WEMQAEGIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKC 218
            EM+ EGI PD+F IT+ LHACAC G LENGK++H+YI +N +Q  LFV+N+LMDMYAKC
Sbjct: 341 HEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKC 400

Query: 217 GKMEDARLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKEFKPNGVTMACILP 38
           G M DA  +F +M+V+D +SWNT+IGGYSKNS PNEA  +F+EMQ   KPN +TMACILP
Sbjct: 401 GSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILP 460

Query: 37  ACASLSALDRGR 2
           ACASL+AL+RG+
Sbjct: 461 ACASLAALERGQ 472



 Score =  140 bits (353), Expect = 2e-31
 Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 1/188 (0%)
 Frame = -3

Query: 565 EIIVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQ 386
           ++ V+N L+DMY K G +  A  VF ++  + +VSW +M+ GY++    + A+ LF EMQ
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ 445

Query: 385 AEGIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKME 206
               KP+   +   L ACA   +LE G+ IH +I +NG  L   VAN+L+DMY KCG + 
Sbjct: 446 YNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 504

Query: 205 DARLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKE-FKPNGVTMACILPACA 29
            ARL+FD +  +D +SW  +I GY  +   +EA   F EM+    +P+ V+   IL AC+
Sbjct: 505 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 564

Query: 28  SLSALDRG 5
               LD G
Sbjct: 565 HSGLLDEG 572



 Score =  112 bits (280), Expect = 5e-23
 Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
 Frame = -3

Query: 514 LNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEGIKPDMFAITSALHA 335
           + SA ++F ++ +R V+SW SM++GY   G  ++ ++LF +M   GI  D+  + S +  
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAG 260

Query: 334 CACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDARLIFDQMRVRDAISW 155
           C+  G L  G+ +H Y  K      L + N L+DMY+K G +  A  +F+ M  R  +SW
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSW 320

Query: 154 NTIIGGYSKNSSPNEAFCIFLEMQKE-FKPNGVTMACILPACASLSALDRGR 2
            ++I GY++    + +  +F EM+KE   P+  T+  IL ACA    L+ G+
Sbjct: 321 TSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGK 372



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
 Frame = -3

Query: 556 VNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEG 377
           V N LVDMY K G L  A  +F  I  + +VSWT M+AGY   G    AI  F EM+  G
Sbjct: 489 VANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSG 548

Query: 376 IKPDMFAITSALHACACNGSLENGKNIHDYITKN-GLQLSLFVANSLMDMYAKCGKMEDA 200
           I+PD  +  S L+AC+ +G L+ G    + +  N  ++        ++D+ A+ G +  A
Sbjct: 549 IEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKA 608

Query: 199 RLIFDQMRVR-DAISWNTIIGG 137
                 M +  DA  W  ++ G
Sbjct: 609 YKFIKMMPIEPDATIWGALLCG 630



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
 Frame = -3

Query: 469 VVSWTSMLAGYARLGEYDRAIELFWEMQAEGIKPDMFAIT--SALHACACNGSLENGKNI 296
           +  +   +  +  LG   RA+EL      +  KPD+   T  S L  CA   S+++G+ I
Sbjct: 68  ITDYNIEICRFCELGNLRRAMELI----NQSPKPDLELRTYCSVLQLCADLKSIQDGRRI 123

Query: 295 HDYITKNGLQLSLFVANSLMDMYAKCGKMEDARLIFDQMRVRDAISWNTIIGGYSKNSSP 116
           H  I  N +++   + + L+ MY  CG + + R IFD++       WN ++ GY+K  + 
Sbjct: 124 HSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNF 183

Query: 115 NEAFCIFLEMQK 80
            E+  +F  M++
Sbjct: 184 RESLSLFKRMRE 195


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
           gi|449500809|ref|XP_004161200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  250 bits (638), Expect = 1e-64
 Identities = 116/192 (60%), Positives = 155/192 (80%)
 Frame = -3

Query: 577 SFDGEIIVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELF 398
           + D E+  NNTL+DMY+K GDLNSA+RVF ++D ++VVSWTSM+ GY R G  D AI+LF
Sbjct: 383 TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLF 442

Query: 397 WEMQAEGIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKC 218
            EM++ G+ PD++A+TS L+ACA NG+L++GK +HDYI +N L+ + FV+N+L DMYAKC
Sbjct: 443 DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC 502

Query: 217 GKMEDARLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKEFKPNGVTMACILP 38
           G M+DA  +F  M+ +D ISWNT+IGGY+KNS PNEA  +F EMQ+E KP+G T+ACILP
Sbjct: 503 GSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACILP 562

Query: 37  ACASLSALDRGR 2
           ACASL+ALD+GR
Sbjct: 563 ACASLAALDKGR 574



 Score =  130 bits (326), Expect = 2e-28
 Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
 Frame = -3

Query: 556  VNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEG 377
            V+N L DMY K G +  A  VF  +  + V+SW +M+ GY +    + A+ LF EMQ E 
Sbjct: 491  VSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES 550

Query: 376  IKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDAR 197
             KPD   +   L ACA   +L+ G+ IH Y  +NG     +V N+++DMY KCG +  AR
Sbjct: 551  -KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLAR 609

Query: 196  LIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKE-FKPNGVTMACILPACASLS 20
             +FD +  +D +SW  +I GY  +   +EA   F +M+    +P+ V+   IL AC+   
Sbjct: 610  SLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSG 669

Query: 19   ALDRG 5
             LD G
Sbjct: 670  LLDEG 674



 Score =  108 bits (270), Expect = 7e-22
 Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 2/193 (1%)
 Frame = -3

Query: 574 FDGEIIVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFW 395
           F+    V N+L+  Y     +  A ++F ++ +R V+SW SM++GY + G  DR IE+F 
Sbjct: 282 FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFI 341

Query: 394 EMQAEGIKPDMFAITSALHACACNGSLENGKNIHDYITKNG-LQLSLFVANSLMDMYAKC 218
           +M   G+  D+  + +   ACA  G+L  GK +H Y  K   L   +   N+L+DMY+KC
Sbjct: 342 KMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKC 401

Query: 217 GKMEDARLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQ-KEFKPNGVTMACIL 41
           G +  A  +F++M  +  +SW ++I GY +    + A  +F EM+ +   P+   +  IL
Sbjct: 402 GDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSIL 461

Query: 40  PACASLSALDRGR 2
            ACA    L  G+
Sbjct: 462 NACAINGNLKSGK 474



 Score =  108 bits (269), Expect = 9e-22
 Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
 Frame = -3

Query: 559 IVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAE 380
           I+   LV MY K GDL     VF K+    +  W  M++ Y+  G Y  +I LF +M   
Sbjct: 186 ILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLEL 245

Query: 379 GIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDA 200
           GIKP+ +  +S L   A    +E G+ +H  I K G      V NSL+  Y    K+  A
Sbjct: 246 GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCA 305

Query: 199 RLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQK-EFKPNGVTMACILPACASL 23
           + +FD++  RD ISWN++I GY KN   +    IF++M       +  TM  +  ACA++
Sbjct: 306 QKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI 365

Query: 22  SALDRGR 2
             L  G+
Sbjct: 366 GTLLLGK 372



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
 Frame = -3

Query: 556  VNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEG 377
            V N +VDMY K G L  A  +F  I N+ +VSWT M+AGY   G    AI  F +M+  G
Sbjct: 591  VTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTG 650

Query: 376  IKPDMFAITSALHACACNGSLENGKNIHDYITKN-GLQLSLFVANSLMDMYAKCGKMEDA 200
            I+PD  +  S L+AC+ +G L+ G  I + + K   ++ +L     ++D+ A+ G +  A
Sbjct: 651  IEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKA 710

Query: 199  RLIFDQMRVR-DAISWNTIIGG 137
                  M ++ DA  W  ++ G
Sbjct: 711  HKFIKAMPIKPDATIWGALLCG 732



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
 Frame = -3

Query: 439 YARLGEYDRAIELFWEMQAEGIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLS 260
           +  +G+   A+EL    Q      D+ A  S L  CA   S+ +G+ +   I  +G+ + 
Sbjct: 127 FCEVGDLKNAMELLCSSQNSNF--DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMID 184

Query: 259 LFVANSLMDMYAKCGKMEDARLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEM-Q 83
             +   L+ MY KCG +++ R++FD++       WN +I  YS + +  E+  +F +M +
Sbjct: 185 GILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLE 244

Query: 82  KEFKPNGVTMACILPACASLSALDRGR 2
              KPN  T + IL   A+++ ++ GR
Sbjct: 245 LGIKPNSYTFSSILKCFAAVARVEEGR 271


>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  249 bits (637), Expect = 2e-64
 Identities = 112/191 (58%), Positives = 154/191 (80%)
 Frame = -3

Query: 574  FDGEIIVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFW 395
            F  E++ NNTL+DMY+K G+LN A++ F K+  ++VVSWTS++A Y R G YD AI LF+
Sbjct: 685  FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFY 744

Query: 394  EMQAEGIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCG 215
            EM+++G+ PD++++TS LHACAC  SL+ G+++H+YI KN + L L V+N+LMDMYAKCG
Sbjct: 745  EMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCG 804

Query: 214  KMEDARLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKEFKPNGVTMACILPA 35
             ME+A L+F Q+ V+D +SWNT+IGGYSKNS PNEA  +F EMQKE +P+G+TMAC+LPA
Sbjct: 805  SMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPA 864

Query: 34   CASLSALDRGR 2
            C SL+AL+ GR
Sbjct: 865  CGSLAALEIGR 875



 Score =  136 bits (343), Expect = 2e-30
 Identities = 73/185 (39%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
 Frame = -3

Query: 556  VNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEG 377
            V+N L+DMY K G +  A  VF +I  + +VSW +M+ GY++    + A++LF EMQ E 
Sbjct: 792  VSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES 851

Query: 376  IKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDAR 197
             +PD   +   L AC    +LE G+ IH  I +NG    L VAN+L+DMY KCG +  AR
Sbjct: 852  -RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHAR 910

Query: 196  LIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQ-KEFKPNGVTMACILPACASLS 20
            L+FD +  +D I+W  +I G   +   NEA   F +M+    KP+ +T   IL AC+   
Sbjct: 911  LLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSG 970

Query: 19   ALDRG 5
             L+ G
Sbjct: 971  LLNEG 975



 Score =  118 bits (296), Expect = 6e-25
 Identities = 63/186 (33%), Positives = 107/186 (57%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556  VNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEG 377
            V N+L+  Y K G+++SA ++F ++ +R VVSW SM++G    G    A+E F +M    
Sbjct: 590  VVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILR 649

Query: 376  IKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDAR 197
            +  D+  + +++ ACA  GSL  G+ +H    K      +   N+L+DMY+KCG + DA 
Sbjct: 650  VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAI 709

Query: 196  LIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQ-KEFKPNGVTMACILPACASLS 20
              F++M  +  +SW ++I  Y +    ++A  +F EM+ K   P+  +M  +L ACA  +
Sbjct: 710  QAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGN 769

Query: 19   ALDRGR 2
            +LD+GR
Sbjct: 770  SLDKGR 775



 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
 Frame = -3

Query: 565  EIIVNNTLVDMYTKRGDLNSAMRVFGKI--DNRSVVSWTSMLAGYARLGEYDRAIELFWE 392
            E ++   LV MY   G L    R+F  I  DN+ V  W  M++ YA++G+Y  +I LF +
Sbjct: 485  EGVLGAKLVFMYVSCGALREGRRIFDHILSDNK-VFLWNLMMSEYAKIGDYRESIYLFKK 543

Query: 391  MQAEGIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGK 212
            MQ  GI  + +  +  L   A  G +   K IH  + K G      V NSL+  Y K G+
Sbjct: 544  MQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGE 603

Query: 211  MEDARLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKEFKPNGVTMACI---L 41
            ++ A  +FD++  RD +SWN++I G   N   + A   F++M       GV +A +   +
Sbjct: 604  VDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQML--ILRVGVDLATLVNSV 661

Query: 40   PACASLSALDRGR 2
             ACA++ +L  GR
Sbjct: 662  AACANVGSLSLGR 674



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = -3

Query: 574  FDGEIIVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFW 395
            +  E+ V N L+DMY K G L  A  +F  I  + +++WT M++G    G  + AI  F 
Sbjct: 886  YSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQ 945

Query: 394  EMQAEGIKPDMFAITSALHACACNGSLENGKN-IHDYITKNGLQLSLFVANSLMDMYAKC 218
            +M+  GIKPD    TS L+AC+ +G L  G    +  I++  ++  L     ++D+ A+ 
Sbjct: 946  KMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLART 1005

Query: 217  GKMEDARLIFDQMRVR-DAISWNTIIGG 137
            G +  A  + + M ++ DA  W  ++ G
Sbjct: 1006 GNLSKAYNLIETMPIKPDATIWGALLCG 1033



 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
 Frame = -3

Query: 493 FGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEGIKPDMFAITSALHACACNGSL 314
           F K+D  + +        +  +G+   A+EL    Q   +  D+ A +S L  CA +  L
Sbjct: 416 FAKLDENTKI------CKFCEVGDLRNAVELLRMSQKSEL--DLNAYSSILQLCAEHKCL 467

Query: 313 ENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDARLIFDQMRVRDAI-SWNTIIGG 137
           + GK +H  I+ NG+ +   +   L+ MY  CG + + R IFD +   + +  WN ++  
Sbjct: 468 QEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSE 527

Query: 136 YSKNSSPNEAFCIFLEMQK-EFKPNGVTMACILPACASL 23
           Y+K     E+  +F +MQK     N  T +CIL   A+L
Sbjct: 528 YAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATL 566


>ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538489|gb|EEF40094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 640

 Score =  247 bits (631), Expect = 9e-64
 Identities = 116/183 (63%), Positives = 144/183 (78%)
 Frame = -3

Query: 550 NTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEGIK 371
           NTL+DMY+K GDLN+A+RVF K+  RSVVSWTS++AGYAR G     I LF EM+ EG++
Sbjct: 340 NTLLDMYSKCGDLNNAIRVFQKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREGVR 399

Query: 370 PDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDARLI 191
           PD F +T+ LHACAC+GSLE GK++HDY+ +N +Q    V NSLMDMYAKCG MEDA L+
Sbjct: 400 PDNFTVTAVLHACACSGSLEIGKDVHDYVKENNMQKDRIVCNSLMDMYAKCGSMEDANLV 459

Query: 190 FDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKEFKPNGVTMACILPACASLSALD 11
           F +M  +D +SWNT+IGGYSKN  PNE   +F+ M +E KP+G TMACILPACASL+ALD
Sbjct: 460 FLEMPNKDIVSWNTMIGGYSKNGRPNETLHLFVAMVQELKPDGRTMACILPACASLAALD 519

Query: 10  RGR 2
           RGR
Sbjct: 520 RGR 522



 Score =  123 bits (309), Expect = 2e-26
 Identities = 61/186 (32%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 VNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEG 377
           V N+L+  Y K   + +A  VF ++ NR +VSW SM++G       ++ I++F EM   G
Sbjct: 237 VVNSLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLG 296

Query: 376 IKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDAR 197
           +  D+  + + L ACA +G+   G+ +H +  K  L   +   N+L+DMY+KCG + +A 
Sbjct: 297 VSFDLVTLVNVLAACANSGNFPLGRVLHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAI 356

Query: 196 LIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKE-FKPNGVTMACILPACASLS 20
            +F +M  R  +SW ++I GY++     E   +F EM++E  +P+  T+  +L ACA   
Sbjct: 357 RVFQKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREGVRPDNFTVTAVLHACACSG 416

Query: 19  ALDRGR 2
           +L+ G+
Sbjct: 417 SLEIGK 422



 Score =  122 bits (306), Expect = 4e-26
 Identities = 63/141 (44%), Positives = 88/141 (62%)
 Frame = -3

Query: 559 IVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAE 380
           IV N+L+DMY K G +  A  VF ++ N+ +VSW +M+ GY++ G  +  + LF  M  E
Sbjct: 438 IVCNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYSKNGRPNETLHLFVAMVQE 497

Query: 379 GIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDA 200
            +KPD   +   L ACA   +L+ G+ IH YI +NG    L VAN+L+DMYAKCG +  A
Sbjct: 498 -LKPDGRTMACILPACASLAALDRGREIHGYIQRNGCFDDLHVANALIDMYAKCGALALA 556

Query: 199 RLIFDQMRVRDAISWNTIIGG 137
           RL FD + V+D ISW  +I G
Sbjct: 557 RLFFDMIPVKDLISWTVMIAG 577



 Score =  111 bits (278), Expect = 8e-23
 Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
 Frame = -3

Query: 559 IVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAE 380
           ++   LV MY   GD+     +F KI N  V  W  ML+GYA++G ++ ++ LF +M   
Sbjct: 135 LLGTKLVFMYVNCGDIREGRVIFDKIANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDL 194

Query: 379 GIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDA 200
           GI+ +   ++  L   A  GS++ G+ +H Y+ K G      V NSL+  Y K  K+E A
Sbjct: 195 GIQVNSHTVSCILKCFAALGSVKEGEWVHGYLLKLGFGSYNTVVNSLISFYFKTRKIEAA 254

Query: 199 RLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEM-QKEFKPNGVTMACILPACASL 23
             +FD+++ RD +SWN++I G   N  P +   +F EM       + VT+  +L ACA+ 
Sbjct: 255 YEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFDLVTLVNVLAACANS 314

Query: 22  SALDRGR 2
                GR
Sbjct: 315 GNFPLGR 321



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
 Frame = -3

Query: 487 KIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEGIKPDMFAITSALHACACNGSLEN 308
           K ++  +  +   +     +G    AIEL        I  + +   S L  CA   SL+ 
Sbjct: 60  KEEDFKIADFNRKICELCEVGSLKNAIELLDMYPKSNIDSNTYC--SILQLCAELNSLQE 117

Query: 307 GKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDARLIFDQMRVRDAISWNTIIGGYSK 128
           GK +H +I+ +G+ +   +   L+ MY  CG + + R+IFD++       WN ++ GY+K
Sbjct: 118 GKKVHSFISSSGIFVDGLLGTKLVFMYVNCGDIREGRVIFDKIANEKVFLWNLMLSGYAK 177

Query: 127 NSSPNEAFCIFLEM-QKEFKPNGVTMACILPACASLSALDRG 5
             +  E+  +F +M     + N  T++CIL   A+L ++  G
Sbjct: 178 IGAFEESVYLFRKMLDLGIQVNSHTVSCILKCFAALGSVKEG 219


>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  241 bits (616), Expect = 5e-62
 Identities = 114/183 (62%), Positives = 144/183 (78%)
 Frame = -3

Query: 550 NTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQAEGIK 371
           NTL+DMY K G L+ A+ VF  +  R+VV+WTS++A YAR G  D AI LF EM  EG+ 
Sbjct: 37  NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96

Query: 370 PDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDARLI 191
           PD+F IT+ LHACACNGSLENGK++H+YI +N +Q ++FV N+LMDMYAKCG MEDA  +
Sbjct: 97  PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156

Query: 190 FDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKEFKPNGVTMACILPACASLSALD 11
           F +M V+D ISWNT+IGGYSKNS PNEA  +F +M  E KP+G T+ACILPACASL++LD
Sbjct: 157 FLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLD 216

Query: 10  RGR 2
           RG+
Sbjct: 217 RGK 219



 Score =  132 bits (331), Expect = 6e-29
 Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 1/187 (0%)
 Frame = -3

Query: 562 IIVNNTLVDMYTKRGDLNSAMRVFGKIDNRSVVSWTSMLAGYARLGEYDRAIELFWEMQA 383
           I V N L+DMY K G +  A  VF ++  + ++SW +M+ GY++    + A+ LF +M  
Sbjct: 134 IFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVL 193

Query: 382 EGIKPDMFAITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMED 203
           E +KPD   +   L ACA   SL+ GK +H +I +NG      VAN+L+DMY KCG    
Sbjct: 194 E-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVL 252

Query: 202 ARLIFDQMRVRDAISWNTIIGGYSKNSSPNEAFCIFLEM-QKEFKPNGVTMACILPACAS 26
           ARL+FD +  +D I+W  +I GY  +   N A   F EM Q   +P+ V+   IL AC+ 
Sbjct: 253 ARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSH 312

Query: 25  LSALDRG 5
              LD G
Sbjct: 313 SGLLDEG 319



 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
 Frame = -3

Query: 355 ITSALHACACNGSLENGKNIHDYITKNGLQLSLFVANSLMDMYAKCGKMEDARLIFDQMR 176
           + S L ACA  G +  G+ +H    K  +       N+L+DMYAKCG ++ A L+FD M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 175 VRDAISWNTIIGGYSKNSSPNEAFCIFLEMQKE-FKPNGVTMACILPACASLSALDRGR 2
           VR  ++W ++I  Y++    +EA  +F EM +E   P+  T+  +L ACA   +L+ G+
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGK 119