BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033228
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30660.3| unnamed protein product [Vitis vinifera]              216   2e-54
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   216   2e-54
emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]   212   3e-53
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...   204   8e-51
ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49

>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  216 bits (550), Expect = 2e-54
 Identities = 105/152 (69%), Positives = 130/152 (85%)
 Frame = -2

Query: 456 KPVHGMIVKFNVKSDDVLFTALVDSYAKNGKVDYARRVFDKVLERNVMCSTTMILGYMNE 277
           K VH  I++ NV+SDDVL+TALVDSY KNGKV YARRVFD +L++NV+CST+MI GYM++
Sbjct: 169 KVVHAQILRSNVESDDVLYTALVDSYVKNGKVGYARRVFDMMLDKNVLCSTSMISGYMSQ 228

Query: 276 GSFEKA*EIFNKTVYKDVVVFNAMIEGYSKSIETAMRSVEVYIQMQRLSFRSTISTFVSV 97
           GS E A +IF +TV KDVVVFNAMIEGYSKS+ETA RS+EVYI MQRL+FR T+STF SV
Sbjct: 229 GSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASV 288

Query: 96  IGACTVLSEFEVGHQVQSQLMKMEIFTDVRLG 1
           IGAC+VL+ FE+G QVQSQL+KM  + D+++G
Sbjct: 289 IGACSVLTVFEIGQQVQSQLVKMNFYNDIKMG 320



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/70 (41%), Positives = 46/70 (65%)
 Frame = -2

Query: 450 VHGMIVKFNVKSDDVLFTALVDSYAKNGKVDYARRVFDKVLERNVMCSTTMILGYMNEGS 271
           V   +VK N  +D  + +AL+D Y+K G+++ ARRVFD + E+NV   T+MI GY   G+
Sbjct: 304 VQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGN 363

Query: 270 FEKA*EIFNK 241
             +A E+F++
Sbjct: 364 SNEALELFSR 373


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score =  216 bits (550), Expect = 2e-54
 Identities = 105/152 (69%), Positives = 130/152 (85%)
 Frame = -2

Query: 456 KPVHGMIVKFNVKSDDVLFTALVDSYAKNGKVDYARRVFDKVLERNVMCSTTMILGYMNE 277
           K VH  I++ NV+SDDVL+TALVDSY KNGKV YARRVFD +L++NV+CST+MI GYM++
Sbjct: 169 KVVHAQILRSNVESDDVLYTALVDSYVKNGKVGYARRVFDMMLDKNVLCSTSMISGYMSQ 228

Query: 276 GSFEKA*EIFNKTVYKDVVVFNAMIEGYSKSIETAMRSVEVYIQMQRLSFRSTISTFVSV 97
           GS E A +IF +TV KDVVVFNAMIEGYSKS+ETA RS+EVYI MQRL+FR T+STF SV
Sbjct: 229 GSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASV 288

Query: 96  IGACTVLSEFEVGHQVQSQLMKMEIFTDVRLG 1
           IGAC+VL+ FE+G QVQSQL+KM  + D+++G
Sbjct: 289 IGACSVLTVFEIGQQVQSQLVKMNFYNDIKMG 320



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/70 (41%), Positives = 46/70 (65%)
 Frame = -2

Query: 450 VHGMIVKFNVKSDDVLFTALVDSYAKNGKVDYARRVFDKVLERNVMCSTTMILGYMNEGS 271
           V   +VK N  +D  + +AL+D Y+K G+++ ARRVFD + E+NV   T+MI GY   G+
Sbjct: 304 VQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGN 363

Query: 270 FEKA*EIFNK 241
             +A E+F++
Sbjct: 364 SNEALELFSR 373


>emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]
          Length = 504

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/152 (67%), Positives = 129/152 (84%)
 Frame = -2

Query: 456 KPVHGMIVKFNVKSDDVLFTALVDSYAKNGKVDYARRVFDKVLERNVMCSTTMILGYMNE 277
           K VH  I++ NV+ DDVL+TALVDSY KNGKV YARRVFD +L++NV+CST+MI GYM++
Sbjct: 169 KVVHAQILRSNVEXDDVLYTALVDSYVKNGKVGYARRVFDMMLDKNVLCSTSMISGYMSQ 228

Query: 276 GSFEKA*EIFNKTVYKDVVVFNAMIEGYSKSIETAMRSVEVYIQMQRLSFRSTISTFVSV 97
           GS E A +IF +TV KDVVVFNAMIEGYSKS+ETA RS+EVYI MQRL+FR T+STF SV
Sbjct: 229 GSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASV 288

Query: 96  IGACTVLSEFEVGHQVQSQLMKMEIFTDVRLG 1
           IGAC+VL+  E+G QVQSQL+KM+ + D+++G
Sbjct: 289 IGACSVLTVXEIGQQVQSQLVKMBFYNDIKMG 320



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/70 (40%), Positives = 46/70 (65%)
 Frame = -2

Query: 450 VHGMIVKFNVKSDDVLFTALVDSYAKNGKVDYARRVFDKVLERNVMCSTTMILGYMNEGS 271
           V   +VK +  +D  + +AL+D Y+K G+++ ARRVFD + E+NV   T+MI GY   G+
Sbjct: 304 VQSQLVKMBFYNDIKMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGN 363

Query: 270 FEKA*EIFNK 241
             +A E+F++
Sbjct: 364 SNEALELFSR 373


>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  204 bits (518), Expect = 8e-51
 Identities = 98/150 (65%), Positives = 124/150 (82%)
 Frame = -2

Query: 450 VHGMIVKFNVKSDDVLFTALVDSYAKNGKVDYARRVFDKVLERNVMCSTTMILGYMNEGS 271
           VHG I+K  V+ DDVL+TALVDSY K+G+V YAR+VFD ++E+NV+CST+MI GYMN GS
Sbjct: 169 VHGQILKSEVEPDDVLYTALVDSYVKSGRVGYARKVFDMMMEKNVICSTSMISGYMNRGS 228

Query: 270 FEKA*EIFNKTVYKDVVVFNAMIEGYSKSIETAMRSVEVYIQMQRLSFRSTISTFVSVIG 91
            E A EIF +TV KDVVVFNAMIEGYSKS++TA +++EVY++MQR  FR  +STF SVIG
Sbjct: 229 VEDAEEIFERTVEKDVVVFNAMIEGYSKSVQTAEKALEVYVEMQRYGFRPNLSTFASVIG 288

Query: 90  ACTVLSEFEVGHQVQSQLMKMEIFTDVRLG 1
           AC+VL+ FE+G QVQ QL+K E FT+V+ G
Sbjct: 289 ACSVLAGFEIGQQVQGQLLKREFFTNVKTG 318


>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  197 bits (501), Expect = 7e-49
 Identities = 98/150 (65%), Positives = 120/150 (80%)
 Frame = -2

Query: 450 VHGMIVKFNVKSDDVLFTALVDSYAKNGKVDYARRVFDKVLERNVMCSTTMILGYMNEGS 271
           VH  I+K +VK+DDVL+TALVDSY K+GKV YAR+VFD +LE+NV+CST+MI GYMN+G 
Sbjct: 169 VHAQILKLDVKADDVLYTALVDSYVKSGKVGYARKVFDLMLEKNVICSTSMISGYMNQGF 228

Query: 270 FEKA*EIFNKTVYKDVVVFNAMIEGYSKSIETAMRSVEVYIQMQRLSFRSTISTFVSVIG 91
            E A EIF KTV KD+VVFNAMIEGYSKS+ETAM+++EVY+ MQR   R   STF SV G
Sbjct: 229 VEDAEEIFWKTVEKDIVVFNAMIEGYSKSVETAMKALEVYVDMQRFGLRPNGSTFASVSG 288

Query: 90  ACTVLSEFEVGHQVQSQLMKMEIFTDVRLG 1
           AC+VL+ FE+G QVQ QLMK   F  V++G
Sbjct: 289 ACSVLAGFEIGQQVQCQLMKSGFFNGVKMG 318