BLASTX nr result

ID: Coptis21_contig00033215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033215
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    63   2e-08
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    56   3e-06

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = -3

Query: 291 NNNYRGSNPNINYNT-QGNRPICQVCGKTGHLAIDCHHRMSHSFAGRIPPATLAMMATVN 115
           ++NYR        +    NRP+CQ+CGK+GH AIDC HR  +S+ GR PP  LA M    
Sbjct: 253 SSNYRSQQTRSTPSQLPNNRPVCQICGKSGHTAIDCFHRFDYSYQGRFPPQDLAAMVAET 312

Query: 114 DSS 106
           +++
Sbjct: 313 NAT 315


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
 Frame = -3

Query: 300 QGRNNNYRGSNPNINYNTQGN--RPICQVCGKTGHLAIDCHHRMSHSFAGRIPPATLAMM 127
           +G  NN+  S+ N N  + G+  +P CQVCGK GH+AI+C+HR   ++   +     AM+
Sbjct: 230 RGSFNNHSYSSRNFNNVSGGSNGKPQCQVCGKYGHIAINCYHRFDQTYQPTMNNHLAAMV 289

Query: 126 A---TVNDSSQYPESQSGY--GPNLNSQSLFESSHNNYA 25
           A   TV D S Y ++ + +   PNLN      +SH  +A
Sbjct: 290 ATPSTVGDESWYMDTGATHHLTPNLNKL----NSHTPFA 324


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